Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq411 176 6e-39 >seq411 Length=240905 Score = 176 bits (194), Expect = 6e-39 Identities = 624/963 (65%), Gaps = 14/963 (1%) Strand=Plus/Minus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| |||||| || || || ||||| ||||| | | | | || | || |||||| Sbjct 124645 GCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATCTCA 124586 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||| | || || |||||| ||||| | || | || || ||||| ||| Sbjct 124585 GTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCA 124526 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 |||||||| || || ||||| || |||||| ||| |||| | ||| | || || | | Sbjct 124525 GCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCATAC 124466 Query 65916 CAGACGACTCGAGCCTTTATTATAG-ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATA 65974 ||||| | |||| | | | | | | || |||| ||||| | || || Sbjct 124465 CAGACCTTTTGAGCGCGGACAGTCTCACGTCCACGACCTT-CTCTCTCGTAGCGGGTGTA 124407 Query 65975 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 66034 || ||||||||||| || | |||| | | ||||| || |||| || ||||| Sbjct 124406 CAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACAT 124347 Query 66035 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 66094 | | ||| ||| ||| | | || || ||||| || ||||| || ||||||||||| Sbjct 124346 GAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAGC 124287 Query 66095 TATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154 | || | ||| | | | |||||| ||||| ||||| || || | ||| Sbjct 124286 GAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATGAA 124227 Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214 | || | ||| ||||| || || | ||| ||||| | | ||||| || ||||| Sbjct 124226 GGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTGTT 124167 Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 || || || || | || | || |||||||| || || | |||||| || || | ||| Sbjct 124166 GCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGACC 124107 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||||||||| || || || || | || || |||| | ||||| || || | | Sbjct 124106 ATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTT-GTGGCAGT 124048 Query 66335 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 66393 | || || || || || || | || ||||| | ||||| || | || || |||| Sbjct 124047 TCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCGTAGA 123988 Query 66394 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA--TTTGGTGACG 66451 | ||||| || || |||||| |||||| | | || || || || | || || Sbjct 123987 TACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATTCG 123928 Query 66452 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT-TTCAGAAAGTA 66510 | || || || | || | ||||| |||||||| || || |||| ||| | ||| Sbjct 123927 GC--GTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTA 123870 Query 66511 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 66570 | ||||| |||||||| || | || ||||| || ||||| || || ||||||| Sbjct 123869 G-TTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCCACACGCA 123811 Query 66571 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 66630 | | ||||||||| ||||| || | | ||| | || | |||||| || || Sbjct 123810 TGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGCGTT 123751 Query 66631 CCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGA 66688 ||| || || |||||||| || | ||| ||||| |||| || || | ||| | || Sbjct 123750 CCAGCGTCTTGAAACCAAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAATGGCAGA 123693 Query 66689 GTT 66691 ||| Sbjct 123692 GTT 123690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658156798173800