Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq411 174 2e-38
>seq411
Length=240905
Score = 174 bits (192), Expect = 2e-38
Identities = 624/961 (65%), Gaps = 20/961 (2%)
Strand=Plus/Minus
Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679
|||||| || || || ||||| ||||| | | | | || | || || ||||||||
Sbjct 124640 AGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATCTCAGTGCA 124581
Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739
| ||| || ||| || ||||| | || | || || ||||| ||| |||||
Sbjct 124580 CAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATC 124521
Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799
||| || || ||||| || |||||| ||| |||| | ||| | || || | ||||||
Sbjct 124520 CTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCATACCAGAC 124461
Query 79800 GACTCGAGCCTTTATTATAG-ACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATC 79858
| |||| | | || | | | || |||| ||||| | || || |
Sbjct 124460 CTTTTGAGCGCGGACAGTCTCACGTCCACGACCTT-CTCTCTCGTAGCGGGTGTACAGCT 124402
Query 79859 GTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACG 79918
||||||||||| || | ||||| | | ||||| || || | || ||||| | |
Sbjct 124401 CCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACATGAGTG 124342
Query 79919 ACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 79978
||| ||| | | | | || || ||||| || ||||| || ||||||||||| | |
Sbjct 124341 TCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAGCGAAGA 124282
Query 79979 ATAGATCTCTGGTTCTATGC---TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035
| ||||| | || | | || ||||| ||||| ||||| || || | ||| |
Sbjct 124281 ACAGATCAC--GTGC-ACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATGAAGG 124225
Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095
|| | ||| | ||||| || || | ||| ||||| | | || || || ||||| |
Sbjct 124224 AGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTGTTGC 124165
Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155
| || || || | || | || |||||||| || || | |||||| || || | |||||
Sbjct 124164 CACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGACCAT 124105
Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT- 80214
||||||| || || || || | || || |||| | ||||| || || | | |
Sbjct 124104 TGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTT-GTGGCAGTTC 124046
Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274
|| || || || || || | || ||||| | ||||| || | || || |||||
Sbjct 124045 AGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCGTAGATA 123986
Query 80275 CCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACA--TTTGGTGACGAC 80332
||||| ||||| ||||| |||||| | | || || || || | || || |
Sbjct 123985 CCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATTCGGC 123926
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGA 80391
|| || || | || | ||||| |||||||| || || |||| | |||| ||||
Sbjct 123925 --GTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTAG- 123869
Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451
||||| |||||||| || | || ||||| || ||||| || || ||||||||
Sbjct 123868 TTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCCACACGCATG 123809
Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511
| ||||||||| ||||| || | | ||| || || | |||||| || ||||
Sbjct 123808 ATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGCGTTCC 123749
Query 80512 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 80569
| || || |||||||| || | ||| ||||| |||| || || | ||| | ||||
Sbjct 123748 AGCGTCTTGAAACCAAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAATGGCAGAGT 123691
Query 80570 T 80570
|
Sbjct 123690 T 123690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718251337089800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |