Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq680 239 7e-58
seq411 127 3e-24
seq660 116 5e-21
>seq680
Length=821847
Score = 239 bits (264), Expect = 7e-58
Identities = 566/846 (67%), Gaps = 27/846 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | ||||||| | ||||||
Sbjct 340306 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 340365
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || | | ||| ||||| || || ||
Sbjct 340366 TCCAAGGATCTCCACGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTCA 340425
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | || ||||| |||| ||||| || || |||||||| || ||| | |||
Sbjct 340426 CACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 340485
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| || || || |||| ||||| ||||| ||||| ||||||||
Sbjct 340486 TTCAGCGCCGAGGTGCAAATACCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 340545
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---G 125315
|||||| | ||||| || | ||||| || || |||| ||||| |||| || |
Sbjct 340546 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCCAAG 340605
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
|| || |||| | ||||| ||||| ||||||| | || | ||| || | |||||||
Sbjct 340606 CAGCG--AACATA-CCTCTTCAACGCCATCGACAACATCCCTTGTATCCGCAGAAAGGCT 340662
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| | || |||||| ||| | | ||| | | ||| || || | ||
Sbjct 340663 GACTGGGCACTGCGATGGATCTCGGACAAGGACTCTACTTTCGCTATGCGATTGATCGCC 340722
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
|| || || || ||||| |||||||| || || || ||| ||||||| ||| | |||
Sbjct 340723 TTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCGTCCATCTTCTGGTTGAAG 340782
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || || || | |||||| | || || || |||||||||
Sbjct 340783 AAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGC 340842
Query 125556 CTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCCGAGTGCAGA 125612
| ||| |||||| || || ||||| || || || | |||| ||
Sbjct 340843 ATGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCTCAAGAACAAGCCCG---CCAAG 340899
Query 125613 TCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672
|| || || |||| ||||| | | | ||| |||| || || ||||| ||
Sbjct 340900 TCGGTCG-TGCAAAG--CATCATCGTGGAGGCCGTTGCC------ATTGAGCAAGAATTC 340950
Query 125673 CTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732
| ||||| | || || | || | ||||||||| ||||| |||||| |||||
Sbjct 340951 TTGACCGATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTAC 341010
Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAAC 125789
|| |||||||| || || || || ||| || |||| || ||| | ||||||
Sbjct 341011 ATTGAGTTTGTCGCTGACCGACTGCTGCTCG---CTCTTGGCAACCAAAAGTTCTACAAC 341067
Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849
|||| || ||||| || |||||| | ||| || || | || ||||||||||| |||
Sbjct 341068 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTC 341127
Query 125850 GAGAAG 125855
||||||
Sbjct 341128 GAGAAG 341133
>seq411
Length=240905
Score = 127 bits (140), Expect = 3e-24
Identities = 363/553 (66%), Gaps = 4/553 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|||||||||| ||| ||| || | || ||| | | | |||||| || || | ||
Sbjct 124089 ACAAACGGCACATCCAATGGTCTCATCCCGATGTTGCGCGTCTACAATAACACTGCC-CG 124147
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|| || || || ||||| || || || ||||| | ||| ||||| | || || ||
Sbjct 124148 CTATGTCGACCAAGGTGGCAACAAGCGTCCTGGCGCGTTCGCCATCTACCTAGAGCCATG 124207
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| || || | ||| || || | ||||| ||| || || || | ||
Sbjct 124208 GCACGCAGATGTCATCTCCTTCATGGACCTCCGCAAGAACCACGGAAAGGAGGAAGTGCG 124267
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | || |||| | || || ||| | |||||| ||||||||||||| ||| | |
Sbjct 124268 TGCACGTGATCTGTTCTTCGCTCTTTGGATCCCAGATCTGTTCATGAAGCGTGTCGAAGC 124327
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
| | | |||| || ||||||||| | || || ||||| | ||| | ||
Sbjct 124328 CAACGCAGAATGGACACTCATGTGCCCCAATGAGTGCCCTGGTCTCGCTGATGTGTACGG 124387
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGAT-ACGTGAGACGAG 97164
|| ||||| |||| |||||| ||||||| ||| || || ||||||||| |
Sbjct 124388 TGACGAGTTCGAGGAGCTGTACACCCGCTACGAGAGAGAAGGTCGTGGACGTGAGACT-G 124446
Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
|| || | | | | ||| | || ||| || || ||| |||||||| || |
Sbjct 124447 TCCGCGCTCAAAAGGTCTGGTATGCTATCTTGGAAGCCCAGACTGAGACTGGTGGACCTT 124506
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| |||||||||||| | | || ||||| |||||||| || | || || ||||
Sbjct 124507 TCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGAACGATCA 124566
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344
|| | ||||| ||||||| || || | |||||| || | || |||||| || || |
Sbjct 124567 AGAGTTCCAACTTGTGCACTGAGATCATTGAGTACACCGCACCAGACGAGGTCGCCGTGT 124626
Query 97345 GCGTTCTGGCATC 97357
|| || |||||
Sbjct 124627 GCAACCTTGCATC 124639
>seq660
Length=72284
Score = 116 bits (128), Expect = 5e-21
Identities = 177/247 (72%), Gaps = 4/247 (2%)
Strand=Plus/Plus
Query 70044 TCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGC 70103
||||| | || || | |||| ||||| || |||||||| ||||| ||||| |||||||
Sbjct 45895 TCGGCCTTTCCCACCGTGAAGAAGGCGACCTTGGGCCAGTCTACGGGTTCCAATGGAGGC 45954
Query 70104 ACTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAAT 70163
| | || || |||| |||||| | || |||||| | || || || || |||||
Sbjct 45955 ATTTCGGTGCCGAGTACAAGGACTGCCACACCGACTATACTGGACAAGGAGTGGATCAGC 46014
Query 70164 TG-CAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGC 70222
|| | || ||||| ||| ||||||| ||| || || ||| | ||| | ||||
Sbjct 46015 TGGCTGAGG-TCATTCACAAGCTCAAGAACAACCCTTACGACAGGCGCATCATCATGTCT 46073
Query 70223 TCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCA 70281
| ||||||||||| ||| || | | ||||| | ||||| |||||| ||||| |||||
Sbjct 46074 GCCTGGAATCCTGCGGATATGAAGAAGATGGCTTTGCCACCCTGTCACATGTTT-GCTCA 46132
Query 70282 GTTTTAC 70288
||| |||
Sbjct 46133 GTTCTAC 46139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741041182998200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |