Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq679 82.4 5e-11
>seq679
Length=230803
Score = 82.4 bits (90), Expect = 5e-11
Identities = 124/171 (73%), Gaps = 8/171 (5%)
Strand=Plus/Minus
Query 71430 GGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTGTCGAAGGGCAT 71489
||||| ||||||||||||||||||| ||||||| | |||||| | ||| |||||
Sbjct 199535 GGGAATAGCGTGGGGGTTGATGATGATGTCGGGCGTGAGACCGTCCGCGCTGAACGGCAT 199476
Query 71490 GTCCTCCTG--GGTCAG-GACAGCTCCGCATGTCCCCTTTTGCGCCGTGA-ATGACGCAA 71545
||||||||| ||| || || | ||| ||| ||||| || |||||| || ||||
Sbjct 199475 GTCCTCCTGTCGGTAAGTGATA---CCGATTGTACCCTTCTG-TCCGTGACGGGAAGCAA 199420
Query 71546 ACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACGA 71596
|||| || || || | |||| | | | ||| ||||||||||||||
Sbjct 199419 ACTTATCACCGATTTGTGGGACCTTTGTCACTCTCGTCCTCACCTTGACGA 199369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338756769686280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |