Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq679 82.4 5e-11 >seq679 Length=230803 Score = 82.4 bits (90), Expect = 5e-11 Identities = 124/171 (73%), Gaps = 8/171 (5%) Strand=Plus/Minus Query 71430 GGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTGTCGAAGGGCAT 71489 ||||| ||||||||||||||||||| ||||||| | |||||| | ||| ||||| Sbjct 199535 GGGAATAGCGTGGGGGTTGATGATGATGTCGGGCGTGAGACCGTCCGCGCTGAACGGCAT 199476 Query 71490 GTCCTCCTG--GGTCAG-GACAGCTCCGCATGTCCCCTTTTGCGCCGTGA-ATGACGCAA 71545 ||||||||| ||| || || | ||| ||| ||||| || |||||| || |||| Sbjct 199475 GTCCTCCTGTCGGTAAGTGATA---CCGATTGTACCCTTCTG-TCCGTGACGGGAAGCAA 199420 Query 71546 ACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACGA 71596 |||| || || || | |||| | | | ||| |||||||||||||| Sbjct 199419 ACTTATCACCGATTTGTGGGACCTTTGTCACTCTCGTCCTCACCTTGACGA 199369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338756769686280