Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq455 95.1 1e-14 seq530 93.3 4e-14 >seq455 Length=1194790 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||| ||||||||||| | ||| || || | |||| | || || Sbjct 1130778 CACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCTTC 1130837 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || || ||| | ||||| || | ||||| || || || || || || ||||| | Sbjct 1130838 GAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTG 1130897 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTT 94976 || || | |||||| | ||| |||||| || | ||||| |||| |||||||| | Sbjct 1130898 GATCTTGGACTTGACATTGTCGATAGTGTC-GCTCGACTCGACCTCAAGAGTGATGGTCT 1130956 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || || || ||||||||||| Sbjct 1130957 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1130987 >seq530 Length=291 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| ||||||||||| || ||||| || | ||| || || | ||||||| || Sbjct 51 CGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTC--TGATAGTGTGCGAC 108 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||||| ||| || || | ||||| | | ||||| || || || || || || | Sbjct 109 CATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCT 168 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTG 94969 |||| | || || | |||||| | ||| |||||| || | ||||| |||| ||| Sbjct 169 TGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTC-GCTCGACTCGACCTCAAGAGTG 227 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || || || || ||||||||||| Sbjct 228 ATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448280300920200