Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq455 95.1 1e-14
seq530 93.3 4e-14
>seq455
Length=1194790
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||||||||| | ||| || || | |||| | || ||
Sbjct 1130778 CACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCTTC 1130837
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|| || || ||| | ||||| || | ||||| || || || || || || ||||| |
Sbjct 1130838 GAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTG 1130897
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTT 94976
|| || | |||||| | ||| |||||| || | ||||| |||| |||||||| |
Sbjct 1130898 GATCTTGGACTTGACATTGTCGATAGTGTC-GCTCGACTCGACCTCAAGAGTGATGGTCT 1130956
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || || || || |||||||||||
Sbjct 1130957 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1130987
>seq530
Length=291
Score = 93.3 bits (102), Expect = 4e-14
Identities = 154/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851
|||| ||||||||||| || ||||| || | ||| || || | ||||||| ||
Sbjct 51 CGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTC--TGATAGTGTGCGAC 108
Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
|||||||| ||| || || | ||||| | | ||||| || || || || || || |
Sbjct 109 CATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCT 168
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTG 94969
|||| | || || | |||||| | ||| |||||| || | ||||| |||| |||
Sbjct 169 TGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTC-GCTCGACTCGACCTCAAGAGTG 227
Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || || || || || || |||||||||||
Sbjct 228 ATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448280300920200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |