Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq640 104 4e-18
seq581 89.7 8e-14
>seq640
Length=132233
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||||| | || || |||||||| || |||||||||||||||||
Sbjct 92530 GCCAAGCGCCACCGAAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCAGCTAT 92472
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 92471 CCGACGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCTG 92431
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | |||| ||||||| || ||||||| || |
Sbjct 92372 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGCGACG 92313
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || || || |||||||| || || ||||||||||| || | || | ||||| |
Sbjct 92312 CCGTCACATACACTGAGCACGCCAAGCGCAAGACTGTCACATCTCTCGACGTTGTCTACG 92253
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || ||||||||||| | |||| ||||| || |||||
Sbjct 92252 CTCTCAAGCGTCAAGGCCGCACCCTTTACGGTTTCGGTGGTTAA 92209
>seq581
Length=602268
Score = 89.7 bits (98), Expect = 8e-14
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
||| || || ||||| ||||| | |||||||| |||||||| ||||| |||||||||||
Sbjct 25465 TCTGCGCGACAACATTCAAGGTGTAACCAAGCCGGCTATCCGCCGTCTCGCTCGTCGTGG 25524
Query 16513 TGGAGTCAAGCGTGTCTCTGGA 16534
|| ||||||||| ||||||||
Sbjct 25525 CGGTGTCAAGCGTATCTCTGGA 25546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073421672885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |