Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq411 185 1e-41
seq680 134 2e-26
>seq411
Length=240905
Score = 185 bits (204), Expect = 1e-41
Identities = 626/963 (65%), Gaps = 14/963 (1%)
Strand=Plus/Minus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| |||||| || || || ||||| ||||| | | | | || | || ||||||
Sbjct 124645 GCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATCTCA 124586
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
||||| | || || |||||| ||||| | || | || || ||||| |||
Sbjct 124585 GTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCA 124526
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
|||||||| || || ||||| || |||||| ||| |||| | ||| | || || | |
Sbjct 124525 GCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCATAC 124466
Query 63072 CAGACGACTCGAGCCTTTATTATAG-ATTTGTATCTCCTTTCTCTTTCGTATAGTGTATA 63130
||||| | |||| | | | | | |||| |||| ||||| | || ||
Sbjct 124465 CAGACCTTTTGAGCGCGGACAGTCTCACGTCCACGACCTT-CTCTCTCGTAGCGGGTGTA 124407
Query 63131 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 63190
|| ||||||||||| || | |||| | | ||||| || |||| || |||||
Sbjct 124406 CAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACAT 124347
Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250
| | ||| ||| ||| | | || || ||||| || ||||| || |||||||||||
Sbjct 124346 GAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAGC 124287
Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310
| || ||||| | | | |||||| ||||| ||||| || || | |||
Sbjct 124286 GAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATGAA 124227
Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370
| || | ||| | ||||| || || | ||| ||||| | | ||||| || |||||
Sbjct 124226 GGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTGTT 124167
Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430
|| || || || | || | || |||||||| || || | |||||| || || | |||
Sbjct 124166 GCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGACC 124107
Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490
|| ||| | || || || || | || || |||| | ||||| || || | |
Sbjct 124106 ATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTT-GTGGCAGT 124048
Query 63491 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549
| || || || || || || | || ||||| | ||||| || | ||||| ||||
Sbjct 124047 TCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCGTAGA 123988
Query 63550 TACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACA--TTTGGTGACG 63607
||||||| ||||| ||||| |||||| | | || || || || | || ||
Sbjct 123987 TACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATTCG 123928
Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT-TTCAGAAAGTA 63666
| || || || | || | ||||| |||||||| || || |||| ||| | |||
Sbjct 123927 GC--GTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTA 123870
Query 63667 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63726
| ||||| |||||||| || | || ||||| || ||||| || || |||||||
Sbjct 123869 G-TTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCCACACGCA 123811
Query 63727 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63786
| | ||||||||| ||||| || | | ||| | || | |||||| || ||
Sbjct 123810 TGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGCGTT 123751
Query 63787 CCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGA 63844
||| || || |||||||| || | ||| ||||| |||| || || | ||| | ||
Sbjct 123750 CCAGCGTCTTGAAACCAAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAATGGCAGA 123693
Query 63845 GTT 63847
|||
Sbjct 123692 GTT 123690
>seq680
Length=821847
Score = 134 bits (148), Expect = 2e-26
Identities = 371/566 (66%), Gaps = 6/566 (1%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| || || ||||| || ||||| |||||||| | || || ||||||||
Sbjct 340871 AACAGCAGGCAAGCGAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAG 340812
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| ||||| || | ||| || |||||||| || | ||| || ||||| |||||||| ||
Sbjct 340811 AAGGTGAGGCCAGCCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGAGCCG 340752
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTC-TCTCCATA--ACCGGCG 33471
|| |||||||| || || || ||||||||||| || | || | | | | | | | |
Sbjct 340751 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCGATCAATCGCATAGCGAAAGTAGAGTCC 340692
Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33531
|||| ||||| | ||||| || ||||| | | |||||| || | ||
Sbjct 340691 TTGTCCGAGATCCATCGCAGTGCCCAGTCAGCCTTTCTGCGGATACAAGGGATGTTGTCG 340632
Query 33532 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 33591
||||| || ||||| || || | || || | | || || ||||| | ||
Sbjct 340631 ATGGCGTTGAAGAGGTATGTTCGCTGCTTGGGCTCGCTGATGTATGTGTCGATGAGGAGG 340572
Query 33592 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33651
|| | || || || ||||| || || ||||| || |||||||| |||| |||
Sbjct 340571 GAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCC 340512
Query 33652 TCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCA 33711
|| | || || || || | | ||||| || ||| || || || || || |||||
Sbjct 340511 TCCGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCG 340452
Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT--- 33768
|| || || || || | || ||| || || | ||||| | |||
Sbjct 340451 GATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGC 340392
Query 33769 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 33828
|| ||||| || | || ||| || || | ||| | ||||| | ||||| |||||||||
Sbjct 340391 TTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCTTCGGCAGTCCAGAATGATGCC 340332
Query 33829 TCTGCCTTTTTATACATGTTCCAGAT 33854
|| ||||| || ||||||||||| ||
Sbjct 340331 TCGGCCTTCTTGTACATGTTCCATAT 340306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622932054596200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |