Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq411 318 2e-81
>seq411
Length=240905
Score = 318 bits (352), Expect = 2e-81
Identities = 1071/1641 (65%), Gaps = 66/1641 (4%)
Strand=Plus/Plus
Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513
|| ||||| ||| | |||||||| ||| |||| ||||| || ||| | || |||||
Sbjct 123795 CCACAGCACATGATCATGCGTGTGGCTGTTGGAATCCACGGCGACGATATCGAGGCCGCC 123854
Query 363514 ATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAATGT 363571
||||| || || || || | | || | | || ||||| ||||| |||| ||| |||
Sbjct 123855 ATTGAGACCTACAA-CTAC-ATGTCGAACAAATACTTCACACACGCTTCGCCTACACTGT 123912
Query 363572 ACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACG 363631
|| ||||| || | ||| ||||| || |||| ||||| | | | |||||||| |
Sbjct 123913 TCAGCGCTGGTACGCCGAATGCACAGTTGGCTTCATGCTTCTTGATCGACATGAAGGATG 123972
Query 363632 ATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAG 363691
| ||| |||||||||| |||||||| |||| ||| || | || || |||||||| |
Sbjct 123973 ACAGCATTGAGGGTATCTACGACACACTGAAGACTTGCGCCATGATCTCGAAGAATGCTG 124032
Query 363692 GCGGAATTGG--TGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGGC 363747
| || ||||| || | | |||||| | ||||| || | | || |||||| |||
Sbjct 124033 GTGGTATTGGCCTGAACTG--CCACAAGATCCGTGCTACTGGATCA--TACATTGCAGGC 124088
Query 363748 ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807
||| || || ||||| || | || ||| | || || | | || ||||| |
Sbjct 124089 ACAAACGGCACATCCAATGGTCTCATCCCGATGTTGCGCGTCTACAATAACACTGCCCGC 124148
Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867
|| |||||||| ||||| ||||| || ||||| || || || || |||||
Sbjct 124149 TATGTCGACCAAGGTGGCAACAAGCGTCCTGGCGCGTTCGCCATCTACCTAGAGCCATGG 124208
Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGT 363927
|| || ||| | | || | || ||||| || ||| ||||| |||||| |||||
Sbjct 124209 CACGCAGATGTCATCTCCTTCATGGACCTCCGCAAGAACCACGGAAAGGAGGAAGTGCGT 124268
Query 363928 GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT-GGAGGC 363986
|||||||||||||||| || |||||| | | || | || |||||||| || | || |
Sbjct 124269 GCACGTGATCTGTTCTTCGCTCTTTGGATCCCAGATCTGTTCATGAAGCGTGTCGAAGCC 124328
Query 363987 AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGG 364046
| |||| ||| ||||| | ||||| | || || || ||||| | ||||| | ||
Sbjct 124329 AACGCAGAA-TGGACACTCATGTGCCCCAATGAGTGCCCTGGTCTCGCTGATGTGTACGG 124387
Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG----GCTCGTAAGA 364102
|||||| | | | || ||| || || ||| ||| | | ||| |||
Sbjct 124388 TGACGAGTTCGAGGAGCTGTACACCCGCTACGA----GAGAGAAGGTCGTGGACGTGAGA 124443
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| | | ||| || ||| | |||| ||| ||| |||| | |||| |||||| || ||
Sbjct 124444 CTGTCCGCGCTCAAAAGGTCTGGTATGCTATCTTGGAAGCCCAGACTGAGACTGGTGGAC 124503
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
| | ||| | ||||| ||| | |||||||||| ||||||| || |||| || || |
Sbjct 124504 CTTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGAACGA 124563
Query 364223 TTCAGCAGAG---CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
||| |||| |||| | || || ||||| ||||| |||||||| || |||||| |
Sbjct 124564 -TCA--AGAGTTCCAACTTGTGCACTGAGATCATTGAGTACACCGCACCAGACGAGGTCG 124620
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCT-------TCCGGCG--TTTGTAAAAGATGGT- 364329
|||| || |||||||| || | || || | || || ||| || || ||
Sbjct 124621 CCGTGTGCAACCTTGCATCTCTTGCTCTGCCAACCTACGTCGATCTTGAGAACGAGCGTT 124680
Query 364330 ---ACTTT-TGA----CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATC 364381
||||| || |||| || | | | | ||| ||| | |||||
Sbjct 124681 TCGACTTTGAGAAGCTCCACGAGGTTGTGCAAGTCGTCACCAA-----GAACTTG----- 124730
Query 364382 TCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGC 364441
||||| | ||||| || | || ||| | ||||| || || || ||||
Sbjct 124731 --AACAAGATCATCGAAGTCAACCACTACCCAGTGCCTGAGGCGAAGAAGAGCAACATGC 124788
Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAG-GGCCTCGCTGACGTTTTTATGATGCTCAA- 364499
| || | || || ||||| ||||| ||| || || ||||| | ||| || |||| |
Sbjct 124789 GCCACAGACCAATCGGTCTCGGTGT-CAGCGGTCTTGCTGATGCTTTCCTG--GCTCTAC 124845
Query 364500 -GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGT 364558
||| | ||||| || || || || ||| || || ||||||| || || || |
Sbjct 124846 GCATGCCTTTTGAGTCTCCAGAGGCCCGTCACCTGAACGTCCAGATCTTCGAGACCATCT 124905
Query 364559 ATTTTGCCGCAATGACTGCTTCGTGTGA-TTTGGCAAAAACCAAGGGAAAGTACTCTACT 364617
| || || | || || ||||| || ||| | || | || | ||| ||
Sbjct 124906 ACCACGCTGCGCTCACCGCATCGTGCGACCTTGCTAGCAAGCTTGGTCCA-TACGAGACG 124964
Query 364618 TATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCA 364677
|| ||||| ||||| |||| |||| || | |||| || | ||| ||||| ||
Sbjct 124965 TACGAGGGCTCCCCGGTTTCAAAGGGCGAACTTCAGTACGAGATGTGGGGCGTCACACCT 125024
Query 364678 TCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC 364737
|| | || ||| ||||||| |||| |||| | |||| ||| ||||||
Sbjct 125025 TCAGACCTCTGGGACTGGGACGCGCTCAAGGCCAAGATCGCTCAGCACGGTGTCCGCAAC 125084
Query 364738 TCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAG 364797
||||| | || || ||||| || || || || | |||||| | || |||||||
Sbjct 125085 TCCCTTCTGGTTGCACCAATGCCTACTGCCTCCACATCGCAGATCATGGGCTTCAACGAG 125144
Query 364798 TGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCG 364857
|||||||| || | || ||||| | || || || || || ||| |||||||||| |
Sbjct 125145 TGCTTCGAGCCATACACTAGCAACATCTACTCTCGTCGTGTGCTTGCCGGAGAATTCCAA 125204
Query 364858 GTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATG 364917
|| || || | | | |||||||| |||||| || ||||| ||| | ||||
Sbjct 125205 GTCGTCAACCCATGGTTGCTGAAGGATCTCGTCGACCGTGGATTGTGGTCTGAGAACATG 125264
Query 364918 AAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGAT 364977
|||||| |||||||||| ||||| ||||| |||||| |||| || ||
Sbjct 125265 AAGAACCGCATCATCGCCGACGGCGGTTCCGTGCAACGCATTCCGAACATTCCGGACGAC 125324
Query 364978 CTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCG 365037
|| ||| | | ||||| || || |||||||| ||| | | || | |||||
Sbjct 125325 CTCAAGGCGTTGTACAAGACTGTCTGGGAAATCAGTCAGCGCAACATTGTTCAAATGGCC 125384
Query 365038 GCCGATCGCGGTGCTTTTATC 365058
|| || |||||||| || |||
Sbjct 125385 GCGGACCGCGGTGCCTTCATC 125405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303321120020990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |