Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq680 145 7e-30
seq455 131 2e-25
seq530 120 3e-22
seq653 116 3e-21
seq671 84.2 2e-11
>seq680
Length=821847
Score = 145 bits (160), Expect = 7e-30
Identities = 309/454 (68%), Gaps = 7/454 (2%)
Strand=Plus/Plus
Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203
|||||||| ||| || | |||||||| ||| ||||| |||| || || |||
Sbjct 340699 ACTTTCGCTATGCGATTGATCGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCA 340758
Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262
|| || ||||||| | | || || | || | ||||| | ||||| || || |||
Sbjct 340759 TTCGCGTCCATCTTCTGGTTGAAGAAGCGTGGTC-TCATGGCTGGCCTCACCTTCTCCAA 340817
Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322
|||||| || || || ||||||||| |||| || ||||| || || || || | | |
Sbjct 340818 CGAGCTCATCTCCCGTGACGAGGGCATGCACACTGACTTCGCTTGCCTG--CTGTT-CTC 340874
Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACAC-CGTGCTGAGCATGTTCAAGGAGGCGGTGG 46381
|| | | | |||||| || | | | ||||| ||||| || |||||| || |
Sbjct 340875 TCACCTCAAGAACAAGCCCGC-CAAGTCGGTCGTGCAAAGCATCATCGTGGAGGCCGTTG 340933
Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC 46441
|||||||| | || || || || | || ||||| || ||||| |||||||||||
Sbjct 340934 CCATTGAGCAAGAATTCTTGACCGATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTA 340993
Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC 46501
|| |||||| | ||||| |||||||| || ||||||||||| | ||| | | |
Sbjct 340994 AGCTCATGTGCCAGTACATTGAGTTTGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACC 341053
Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561
||| | |||| ||| || || || || ||| | |||||||| || | ||||
Sbjct 341054 AAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCA 341113
Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
| || || || ||||| ||||| || ||||| ||
Sbjct 341114 AGACCAACTTCTTCGAGAAGCGTGTTGGCGACTA 341147
>seq455
Length=1194790
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||||| |||||||| |||||||| ||
Sbjct 1130761 CCACCTCGTAGACGAAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAG 1130820
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || || |||||||| ||| |||| || |||||||||||||| |||
Sbjct 1130821 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGG 1130880
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||| ||| | |||||||
Sbjct 1130881 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTCGACC 1130940
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 1130941 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1130987
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| |||||||| || |||||||||||| |
Sbjct 1130989 CCACCACGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 1131048
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| || |||||||| ||| | || | ||||||||||||||||||
Sbjct 1131049 AGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGAGGA 1131108
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | || ||| | ||||| |
Sbjct 1131109 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTAGACTCCACC 1131168
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | || || |||||
Sbjct 1131169 TCGAGGGTGATAGTCTTGCCGGT 1131191
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||||||||| || || | || |||||| || |||||||| || |
Sbjct 1130533 CCTCCACGAAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTC--TG 1130590
Query 131068 ATGGTGCGCGAG--TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
|| ||| |||| ||||| | ||||||||| ||| |||| | |||||||||||||| |
Sbjct 1130591 ATAGTGTGCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGTG 1130650
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| || || ||||| ||| || ||| | | || | || || | || || |
Sbjct 1130651 GGATACCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATGGTGTCCGATGATTCTA 1130710
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| || || || || || || || ||||| || |||||
Sbjct 1130711 CCTCCAACGTAATCGTCTTGCCTGTGAGTGTCTTGACGAAGATTTGCAT 1130759
>seq530
Length=291
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||||||||| || || | || |||||| || |||||||| || |
Sbjct 39 CCTCCACGAAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTC--TG 96
Query 131068 ATGGTGCGCGAG--TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
|| ||| |||| ||||| | ||||||||| ||| |||| | |||||||||||||| |
Sbjct 97 ATAGTGTGCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGTG 156
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| || || ||||| ||| || ||||| | || | ||| ||| | |||||||
Sbjct 157 GGATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTCGA 216
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 217 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 265
>seq653
Length=579839
Score = 116 bits (128), Expect = 3e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || || || || || | ||| |||||||| || |||||||| |||||
Sbjct 344582 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTG 344641
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| || |||||||||||||| |||
Sbjct 344642 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGG 344701
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 344702 ATTCCCTCCTTGTC 344715
>seq671
Length=186828
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| || ||||| ||||| | ||||| || ||| |||
Sbjct 53987 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAATTGCTTTCCAGCGAAGA 53928
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| ||||||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 53927 TCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 53868
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||||| | ||||| | || | ||| | || || ||||| || || || ||||
Sbjct 53867 CGATGGTATCCGACGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 53808
Query 131225 A 131225
|
Sbjct 53807 A 53807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472001324188800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |