Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq680 340 3e-88
seq411 244 2e-59
>seq680
Length=821847
Score = 340 bits (376), Expect = 3e-88
Identities = 592/852 (69%), Gaps = 12/852 (1%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|| ||| ||||||||||||||| || || |||||| ||||| |||||||| |||
Sbjct 340306 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 340365
Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416
||||||| || |||| | | ||| ||| |||| || ||| || |
Sbjct 340366 TCCAAGGATCTCCACGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTCA 340425
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|| | || || ||||||||||| || |||||||| ||||| |||||||||| | |
Sbjct 340426 CACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 340485
Query 42477 TTCATGAAAGAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| |||||||| ||| ||||| || |||||||||||||||||||| ||
Sbjct 340486 TTCAGCGCCGAGGTGCAAATACCG-GAGGCACGATGCTTCTACGGCTTCCAGATCATGAT 340544
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||| ||| ||| || || || |||| |||||| || |||
Sbjct 340545 GGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCCAA 340604
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655
|||| | || ||||| ||||| || | || || || ||| | ||||| ||
Sbjct 340605 GCAGCGAACATACCTCTTCAACGCCATCGACAACATCCCTTGTATCCGCAGAAAGGCTGA 340664
Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715
|||||| || |||||| | ||| | || |||| | | || | |||||
Sbjct 340665 CTGGGCACTGCGATGGATCTCGGACAAGGACTCTACTTTCGCTATGCGATTGATCGCCTT 340724
Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775
| | || |||||||| ||||||||||| ||| | ||||| |||||||||||| | ||| |
Sbjct 340725 TGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCGTCCATCTTCTGGTTGAAGAA 340784
Query 42776 G-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834
| ||| || ||| | || ||||||||||| ||||| |||||| | | ||||||||
Sbjct 340785 GCGTGGTCTC-ATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCA 340843
Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGG 42894
|||| | ||||| || ||||| |||||||| ||||||| | |||||||| | |||
Sbjct 340844 TGCACACTGACTTCGCTTGCCTGCTGTTCTC---TCACCTCAAGAACAAGCCCGCCAAGT 340900
Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954
| || | ||||||| ||||||||| | || ||| | || ||| | || |
Sbjct 340901 CGGTCGTGCAAAGCATCATCGTGGAGGCCGTTGCCATTGAGCAAGAATTCTTGACCGATG 340960
Query 42955 CGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACG 43014
| ||||| | ||| ||||||||||| | ||||||||| ||||||| ||| |
Sbjct 340961 CTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAGTTTG 341020
Query 43015 TCGCCGACCATCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCC 43073
|||| |||| || ||| | | ||| || | |||||||| | | ||||
Sbjct 341021 TCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAG-TTCTACAACGCCACCAACCCC 341079
Query 43074 TTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 43133
|||||||| |||||||||||||| | | |||||||||||||| ||||||||||| ||
Sbjct 341080 TTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTT 341139
Query 43134 GCCGACTACCAG 43145
| ||||||||||
Sbjct 341140 GGCGACTACCAG 341151
>seq411
Length=240905
Score = 244 bits (270), Expect = 2e-59
Identities = 975/1519 (64%), Gaps = 47/1519 (3%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || || || || ||||| | ||||| || || ||||| |||||| || ||
Sbjct 125213 GTTGACGACTTGGAATTCTCCGGCAAGCACACGACGAGAGTAGATGTTGCTAGTGTATGG 125154
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| || ||||| ||||||| ||| ||||| ||||| || | ||
Sbjct 125153 CTCGAAGCACTCGTTGAAGCCCATGATCTGCGATGTGGAGGCAGTAGGCATTGGTGCAAC 125094
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
||| || ||| | || |||||| ||| | ||||| ||| |||||||||
Sbjct 125093 CAGAAGGGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTGAGCGCGTCCCAGTCCCA 125034
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| | | || |||| ||| ||||||||| || |||| || |||||
Sbjct 125033 GAGGTCTGA-AGGTG--------TGACGCCCCACATCTCGTACTGAAGTTCGCCCTTTGA 124983
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGT-CGCGCTGGGCCAGCTTACAGCTCT 244388
|| ||| ||||||||| ||| ||| ||||| | ||| | | || | ||
Sbjct 124982 AACCGGGGAGCCCTCGTACGTCTCGTATGGACCAAGCTTGCTAG-CAAGGTCGCACGATG 124924
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TG 244447
|| ||| || |||| ||||||||||||||||||| ||||| || ||||||| ||
Sbjct 124923 CGGTGAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGGACGTTCAGGTGACGGGCCTCTG 124864
Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCC-CTGCACGCCGAT 244506
| | || || |||| | || ||| | || || || || ||| || ||||
Sbjct 124863 GAG-ACTCAAAAGGCATGCGTAGAGCCAGGAAAGCATCAGCAAGACCGCTG-ACACCGAG 124806
Query 244507 GCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566
||||| |||||||| ||| ||||| | | || || ||||| ||||| |||| |
Sbjct 124805 ACCGATTGGTCTGTGGCGCATGTTGCTCTTCTTCGCCTCAGGCACTGGGTAGTGGTTGAC 124746
Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAA 244626
||||| | |||||| | ||| ||||| | | || || ||| ||| || |||
Sbjct 124745 TTCGATGATCTTGTTCAAGTTCTTGGTGACGACTTGCACAACCTCGTGGAGCTTCTCAAA 124686
Query 244627 GTCGTA---CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683
|||| | ||||| | ||| || ||| | | ||| ||
Sbjct 124685 GTCGAAACGCTCGTTCTCAAGATCGACGTAGGT-------------TGGCAGAGCAAGA- 124640
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
| || | |||||||| ||||| ||||| || | |||||||| | ||||| |||||
Sbjct 124639 GATG-CAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATCTCAGTGCA 124581
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
| ||| | |||||| || || |||| || || ||| |||| |||| || ||
Sbjct 124580 CAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATC 124521
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
||||||||||||||| || || || ||||| |||||| | | || | |||||
Sbjct 124520 CTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCATACCAGAC 124461
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923
| ||| ||| ||| || | || ||| |||||||||||||||||| |
Sbjct 124460 CTTTTGAGCGCGGACAGTCTCACGTCCACGACCTTCTCTCTCGTAGCGGGTGTACAGCTC 124401
Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983
|||||||||| || | || || | || || |||||| ||||||||||| |
Sbjct 124400 CTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACATGAGTGT 124341
Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043
||| || || | | | ||| | || |||||| || || |||||||| || || |||
Sbjct 124340 CCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAGCGAAGAA 124281
Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103
|| || | | | | || ||| || |||||| | || |||| ||| |
Sbjct 124280 CAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATGAAGGAGAT 124221
Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163
||| || ||||||| ||||| | ||||| |||| ||||| || ||||||||||| ||
Sbjct 124220 GACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTGTTGCCACC 124161
Query 245164 CTGGTCCACCATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219
||||| | | | || || | | ||| ||| ||||| | || | | || |
Sbjct 124160 TTGGTCGA----CATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGACCAT 124105
Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACA 245279
| || |||||| ||||| ||||| | || | | | || ||| | | ||
Sbjct 124104 TGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTTGTGGCAGTTCA 124045
Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339
||| | || || || | ||| ||||| | |||||| |||| | ||||| || |
Sbjct 124044 GGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCGTAGATAC 123985
Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399
|||| |||||||| |||||||| || || ||||| || | || ||| | || ||
Sbjct 123984 CCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATTCGGCG 123925
Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGT 245459
| | | | ||||||| || || ||||| || ||||| | |||| | | | ||
Sbjct 123924 TACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTAGTTGT 123865
Query 245460 ACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGG 245518
| |||| | || ||||| | |||||||||||| | || ||| | |||||
Sbjct 123864 AGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGAT-TCCAACAGCCACACGCATGATC 123806
Query 245519 GTGTGCTGGGGCGTCTCG--ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGA 245576
||||||| || ||||| | | || | | ||||| ||| ||||| || |
Sbjct 123805 ATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGC--GGAGCAAGTATGAGCGTTCCA 123748
Query 245577 GCGTCTTGAACCCAAAGTA 245595
|||||||||| ||||||||
Sbjct 123747 GCGTCTTGAAACCAAAGTA 123729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944316240753200
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