Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq680 127 5e-24
>seq680
Length=821847
Score = 127 bits (140), Expect = 5e-24
Identities = 542/841 (64%), Gaps = 19/841 (2%)
Strand=Plus/Plus
Query 242896 ATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAGTTCCTCTG 242955
|| ||| | ||||| |||||||| | |||| | || ||||| |||| || || ||||
Sbjct 340306 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 340365
Query 242956 AACGCAGACGTCGTCGACTGGCGCGAGAAACTCAATGACGACGAACGTCATTTCATCAAA 243015
| || || ||||||| | || ||||||||||||||| || |||||| |
Sbjct 340366 TCCAAGGATCTCCACGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTCA 340425
Query 243016 CACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCTGCA-GACCAA 243074
||| | || | || ||||| | ||||| || ||||| | || || ||| || | |
Sbjct 340426 CACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 340485
Query 243075 CTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTCAA 243134
|| || | || || | || |||||||| || || | | ||| | | |
Sbjct 340486 -TTCAGCGCCGAGGTGCAAATACCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGAT 340544
Query 243135 CGAATCTATCCATTCTGAACAATATGCTCTTCTTATCGACGCGCTTATTTCAGAT-GAAC 243193
|| ||||| || || ||| | || || |||||| | || |||| | |
Sbjct 340545 GGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACA--TACATCAGCGAGCCC 340602
Query 243194 AAG-AGCGAAACGAGCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCA 243252
||| |||||| | || ||| |||||||||| ||||| || | | | |||||
Sbjct 340603 AAGCAGCGAACATACCTCTTCAACGCCATCGACAACATCCCTTGTATCCGCAGAAAGGCT 340662
Query 243253 AAATGGGCTCAGAAGTGG--CTAGAACCCGGTAAATCATTT-GCTGAGCGTCTCGTCGCC 243309
| ||||| | | ||| || | || || | ||| ||| ||| | |||||
Sbjct 340663 GACTGGGCACTGCGATGGATCTCGGACAAGGACTCTACTTTCGCTATGCGATTGATCGCC 340722
Query 243310 TGGGTGTGC-GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGC 243367
| | ||| || || ||||| | || ||||| ||| ||| ||||||| ||| ||
Sbjct 340723 TTTGC-TGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTC-GCGTCCATCTTCTGGTTGA 340780
Query 243368 GGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGG 243427
||| ||| | ||| |||||||| | || |||||| ||||| || |||||||
Sbjct 340781 AGAAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGG 340840
Query 243428 GCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCG 243487
|| | ||| | |||| | || ||| || | ||| ||||||||| | |
Sbjct 340841 GCATGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCTCAAGAACAAGCCCGC---CA 340897
Query 243488 AAACGGTCAAACAAATCATCACAG---AAGCAGTTGAAAACGAAAAGGAATTCATTTGCG 243544
| ||||| |||| ||||| | | || |||| | || | |||||| | ||
Sbjct 340898 AGTCGGTCGTGCAAAGCATCATCGTGGAGGCCGTTGCCATTGAGCAAGAATTCTTGACCG 340957
Query 243545 ACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAAT 243604
| ||| | || ||| ||| | ||||||||| || | |||||| | |||||||| || |
Sbjct 340958 ATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAGT 341017
Query 243605 TCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACC 243664
| || || ||||| | | |||| ||||| | | || | |||||| ||| ||||
Sbjct 341018 TTGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAGTTCTACAACGCCACCAACC 341077
Query 243665 CCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTG 243724
|||| | ||| |||||| ||| || || || || || ||||||||||| |||||||
Sbjct 341078 CCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 341137
Query 243725 T 243725
|
Sbjct 341138 T 341138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102852515885750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |