Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq411 188 9e-43 seq680 118 1e-21 >seq411 Length=240905 Score = 188 bits (208), Expect = 9e-43 Identities = 1122/1780 (63%), Gaps = 49/1780 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || | | ||| | || |||||||||||||| || ||||| || | Sbjct 125550 TGAACTGAATCGGAGCAGACGCGGCTTGTGTACGGAGGTAGTACATGCCGGTCTTCAGGC 125491 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT-TCCATG 113683 | |||||||| || | ||||| || | |||| | || ||| || | || | Sbjct 125490 CAAGCTTCCAGCCAGTAAAGTGCATGCTGGTGATCTTGCCCA-TGGTGGGCTCCTTCAAG 125432 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| ||||| ||||||||||||||| || || ||||| ||||| | || Sbjct 125431 TGGATGTTCAAGCTTTGAGATTGATCGATGAAGGCACCGCGGTCCGCGGCCATTTGAA-- 125374 Query 113744 ACATCCTTCATCT---TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 || || || |||||||||| ||||| |||| | ||| | || || || Sbjct 125373 -CAATGTTGCGCTGACTGATTTCCCAGACAGTCTTGTACAACGCCTTGAGGTCGTCCGGA 125315 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860 || | | || ||| | ||| || || | || ||| | | |||||| | || Sbjct 125314 ATGTTCGGAATGCGTTGCACGGAACCGCCGTCGGCGATGATGCGGTTCTTCATGTTCTCA 125255 Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACT 113918 ||||| | ||| | |||||||| || | ||| | |||| || || | Sbjct 125254 GACCACAATCCACGGTCGACGAGATCCTTCAGCAACCATGGGT--TGACGACTTGGAATT 125197 Query 113919 CACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977 | || || || || | ||| ||||| ||| | ||||||||||| |||||||| ||| Sbjct 125196 CTCCGGCAAGCACACGACG-AGAGTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTG 125138 Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037 |||| ||| || | |||||||| || ||||| ||||| | |||||| ||| ||| Sbjct 125137 AAGCCCATGATCTGCGATGTGGAGGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGCGG 125078 Query 114038 AGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTG-----AGCTTTG 114092 | ||| | | || ||||||| ||||||||||| || | || | || Sbjct 125077 ACACCGTGCTGAGCGATCTTGGCCTTGAGCGCGTCCCAGTCCCAGAGGTCTGAAGGTGTG 125018 Query 114093 TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATG 114152 | |||| |||| || |||| || || | || | || || ||||| | | Sbjct 125017 ACGCCCC-----ACATCTCGTACTGAAGTTCGCCCTTTGAAACCGGGGAGCCCTCGTACG 124963 Query 114153 TCTCGTATGGGCCCTCAACCTCC--GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 114210 |||||||||| || | | | | || | ||| | || ||| || ||||| || Sbjct 124962 TCTCGTATGGACCA--AGCTTGCTAGCAAGGTCGCACGATGCGGTGAGCGCAGCGTGGTA 124905 Query 114211 CATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTC 114269 || ||||| || || | | |||| || | |||||| || ||||| | | | Sbjct 124904 GATGGTCTCGAAGATCTGGACGTTCAGGTGACG-GGCCTCTGGAGACTCAAAAGGCATGC 124846 Query 114270 GGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 114329 | | || |||| || ||||| ||||||||| || ||||| | || | || Sbjct 124845 GTAGAGCCAGGAAAGCATCAGCAAGACCGCTGACACCGAGACCGATTGGTCTGTGGCGCA 124786 Query 114330 TATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTA 114386 | || ||| || ||| ||| || || || ||||| | | | || | Sbjct 124785 TGTTGCTCTTCTTCGC---CTCAGGCACTGGGTAGTGGTTGACTTCGATGATCTTGTTCA 124729 Query 114387 GATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-C 114445 || |||||||| || | | || || ||||| || | || |||| || || | Sbjct 124728 AGTTCTTGGTGACGACTTGCACAACCTCGTGGAGCTTCTCAAAGTCGAAAC-GCTCGTTC 124670 Query 114446 TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 114505 || || ||| || | || || || | || || || || ||||| | | ||| || Sbjct 124669 TCAAGATCGACGTAGGTTGGCAGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCT 124610 Query 114506 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 114565 | |||||||| || || || || ||||| || |||||||| || || || | |||| Sbjct 124609 GGTGCGGTGTACTCAATGATCTCAGTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTC 124550 Query 114566 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 || || || ||| ||| ||||||||||| |||||| | || || ||||| Sbjct 124549 TTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCA 124490 Query 114626 GTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGC 114685 || |||| | | ||||| | |||||| | || | ||||| | | || Sbjct 124489 GTCTGGGCTTCCAAGATAGCATACCAGACCTTTTGAGCGCGGACAGTCTCACGTCCACGA 124430 Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 || || |||||| ||||| || | || ||||| ||||| | || | ||| Sbjct 124429 CCTTCTCTCTCGTAGCGGGTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGA 124370 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 || || || || ||||| | ||| | ||||| | | || |||||||||||| Sbjct 124369 CCAGGGCACTCATTGGGGCACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATG 124310 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || || ||||||||||| ||||| |||| ||||| || || |||| || | || Sbjct 124309 AACAGATCTGGGATCCAAAGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCG 124250 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || || | |||| ||| |||| ||| |||||||| || || ||||| | Sbjct 124249 TGGTTCTTGCGGAGGTCCATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATG 124190 Query 114926 GCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979 |||| || | | |||| ||| | |||| ||||| | || ||| ||| Sbjct 124189 GCGA---ACGCGCCAGGACGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTG 124133 Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGAC 115039 | ||||| | ||| || |||| ||||| ||| ||| ||||| || ||| || Sbjct 124132 TAGACGCGCAACATCGGGATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGAT 124073 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 | | || | || | ||| || || |||||||| || || ||| ||||| Sbjct 124072 CCAGTAGCACGGATCTTGTGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATG 124013 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 ||||| | | || || ||||||| || || || |||| |||| | |||| | | Sbjct 124012 GCGCAAGTCTTCAGTGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAG 123953 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 ||||| | || |||| | || ||||||||| |||| || || || | ||||| Sbjct 123952 AAGCATGAAGCCAACTGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGT 123893 Query 115220 ATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCC 115278 |||| || | | ||||| | | ||||||||| | | |||| || || || || Sbjct 123892 GTGAA-GTATTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCC 123834 Query 115279 GTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 ||| || || | | || ||||| | ||||| || ||| Sbjct 123833 GTGGATTCCAACAGCCACACGCATGATCATGTGCTGTGGT 123794 >seq680 Length=821847 Score = 118 bits (130), Expect = 1e-21 Identities = 286/428 (67%), Gaps = 20/428 (5%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| ||||| ||||||||||||||||| ||||| ||| | | ||| |||||||| Sbjct 341148 GTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 341089 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA-AATTGTTGGCACCCCAATCTGTTTGAGGAGAC 125876 || || || ||||| | | ||| | || | |||| || | | || || | Sbjct 341088 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCAAGAGCGAGC-AGCAGTC 341030 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | || | ||| |||||||||||| |||| || || |||||| |||| || | Sbjct 341029 GGTCAGCGACAAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGCGC 340970 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | || || || || | ||| | | |||||| | ||||| ||| |||||| Sbjct 340969 AAGGCAGAGCATCGGTCAAGAATTCTTGCTCAATGGCAACGGCCTCC---ACGATG---- 340917 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC-GGCAAA 126051 ||| | | ||| | | | | || |||||| |||| | | ||||| Sbjct 340916 --ATGCTTTGCACGACCGACTTGGCGGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCAAG 340859 Query 126052 C----TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTG 126107 | || ||| | |||||||||||||||||||| || || |||||| || || | Sbjct 340858 CGAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAG 340799 Query 126108 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTC 126167 ||||||||| ||||||||||||||||| || | ||||| || ||||||||||| | Sbjct 340798 CCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGAGCCGGAGAAGAAGATAC 340739 Query 126168 CCTCCACA 126175 |||| ||| Sbjct 340738 CCTCGACA 340731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597339076840600