Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq530 136 4e-27
seq455 118 1e-21
>seq530
Length=291
Score = 136 bits (150), Expect = 4e-27
Identities = 170/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 41976 TATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 42035
||| | ||||| | | ||||| |||||| |||| |||||||||||| || || |||||
Sbjct 33 TATTGCCCTCCACGAAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAG 92
Query 42036 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 42095
|| | || || || | || || | |||||| || ||||| || || |||||||||||
Sbjct 93 TCTGATAGTGTGCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCC 152
Query 42096 GCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT 42155
| ||| | || ||||||||| ||| || |||| | | | |||||||||||
Sbjct 153 GGTGGGATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGAC 212
Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || | |||||||| ||||| || || ||||| || ||||| |||||
Sbjct 213 TCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 265
>seq455
Length=1194790
Score = 118 bits (130), Expect = 1e-21
Identities = 168/234 (72%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 41976 TATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 42035
||| | ||||| | | ||||| |||||| |||| |||||||||||| || || |||||
Sbjct 1130527 TATTGCCCTCCACGAAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAG 1130586
Query 42036 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 42095
|| | || || || | || || | |||||| || ||||| || || |||||||||||
Sbjct 1130587 TCTGATAGTGTGCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCC 1130646
Query 42096 GCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGA 42154
| ||| | | ||||||||| ||| || || | ||| | | | ||||| ||
Sbjct 1130647 GGTGGGATACCCTCCTTGTCTTGGATCTTGCTCTTCA-CGTTGTCGATGGTGTCCGATGA 1130705
Query 42155 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || | ||| || || ||||| || || ||||| || |||||||||||
Sbjct 1130706 TTCTACCTCCAACGTAATCGTCTTGCCTGTGAGTGTCTTGACGAAGATTTGCAT 1130759
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| || ||| | |||||| || | || |||||||| || ||||| || |
Sbjct 1130760 ACCACCTCGTAGACGAAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCCGA 1130819
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || |||| || || ||||| || ||||| || | ||||||||||| | |||
Sbjct 1130820 GAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 1130879
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || ||||||||| ||| || |||| | | | ||||||||||| || ||
Sbjct 1130880 GATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTCGAC 1130939
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| ||||| || || ||||| || ||||| |||||
Sbjct 1130940 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1130987
Score = 107 bits (118), Expect = 2e-18
Identities = 129/170 (76%), Gaps = 4/170 (2%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || |||||||| | ||| || || |||| || || ||||| ||||||||
Sbjct 1131024 CTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCGAA 1131083
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
||||| ||||||||||| | || | || |||||||||| ||| | || | |||| ||
Sbjct 1131084 AATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGA-CG 1131141
Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
| | | | |||||||| || ||||| |||| ||||| || ||||| ||
Sbjct 1131142 TTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTGCCGGT 1131191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543199593138800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |