Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq455 109 5e-19
seq530 84.2 2e-11
>seq455
Length=1194790
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | || | |||||||| ||||| |||||||| || | || ||||| ||||
Sbjct 1130775 AAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTC 1130834
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| || ||||||||||| | || | ||||||||||| || || || || || || ||
Sbjct 1130835 TTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTC 1130894
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| ||| || | || || | | || || || | ||| | |||
Sbjct 1130895 TTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATGGT 1130954
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||||| | || || ||||| || |||||
Sbjct 1130955 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1130987
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || || || ||||||||||| | | ||| || ||||
Sbjct 1131004 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCGTCC 1131063
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || |||||||| || ||||||| ||||||||||| |||||||| || || || ||
Sbjct 1131064 TCGAGTTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 1131123
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | | ||||| || | || | |||
Sbjct 1131124 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTC 1131183
Query 64412 TTGCCGGTCA 64421
||||||||||
Sbjct 1131184 TTGCCGGTCA 1131193
>seq530
Length=291
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || |||||||| |||| | ||||| | || || | ||||||||| || |
Sbjct 75 TCCTTCTGGATGTTGTAGTCTGATAGTGTGCGACCATCCTCCAACTGCTTGCCCGCGAAG 134
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || ||||||||||| || || || || || || ||||| || || ||| |||
Sbjct 135 ATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTG 194
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | | || || || | ||| | |||||||||||| | || || |||
Sbjct 195 TCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACG 254
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 255 AAGATCTGCAT 265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499632652385800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |