Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq411 187 2e-42
>seq411
Length=240905
Score = 187 bits (206), Expect = 2e-42
Identities = 600/921 (65%), Gaps = 14/921 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| ||||| || ||||| || ||| | ||| || ||||||
Sbjct 123720 AACTACCAATACTTTGGTTTCAAGACGCTGGAACGCTCATACTTGCTCCGCATTGATGGC 123779
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| ||||| |||| || || || | ||||| || || | || || |||||| ||
Sbjct 123780 AAAGTTGCCGAGAGACCACAGCACATGATCATGCGTGTGGCTGTTGGAATCCACGGCGAC 123839
Query 93835 GACAT----GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCAT 93890
|| || |||| ||| | || || ||||| | |||| | ||
Sbjct 123840 GATATCGAGGCCGCCA---TTGAGACCTA-CAACTACATGTCGAACAAATACTTCACACA 123895
Query 93891 GGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT 93950
|| | || || ||||||| ||| || || ||| ||||| || |||| || ||| |
Sbjct 123896 CGCTTCGCCTACACTGTTCAGCGCTGGTACGCCGAATGCACAGTTGGCTTCATGCTTCTT 123955
Query 93951 GAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009
||| ||| | |||| ||| ||| || || | ||||| || ||| || || |
Sbjct 123956 GATCGAC-ATGAAGGATGACAGCATTGAGGGTATCTACGACACACTGAAGACTTGCGCCA 124014
Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069
||||| || | || || || || || | | |||| | | ||||| | || |
Sbjct 124015 TGATCTCGAAGAATGCTGGTGGTATTGGCCTGAACTGCCACAAGATCCGTGCTACTGGAT 124074
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
| ||||| || || || ||||| ||||| || ||| |||| ||| | || |||| ||
Sbjct 124075 CATACATTGCAGGCACAAACGGCACATCCAATGGTCTCATCCCGATGTTGCGCGTCTACA 124134
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
| ||| | || ||||| || ||||| ||||| | | | || | ||||| |||
Sbjct 124135 ATAACACTGCCCGCTATGTCGACCAAGGTGGCAACAAGCGTCCTGGCGCGTTCGCCATCT 124194
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
| || ||||| |||||||| || || | ||||| ||||| || ||||||||||| |
Sbjct 124195 ACCTAGAGCCATGGCACGCAGATGTCATCTCCTTCATGGACCTCCGCAAGAACCACGGAA 124254
Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| || | | | || | || || |||| |||||| ||| | ||||| || || ||||
Sbjct 124255 AGGAGGAAGTGCGTGCACGTGATCTGTTCTTCGCTCTTTGGATCCCAGATCTGTTCATGA 124314
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
| || ||||| ||| | | |||| || | || |||||||| || || || ||
Sbjct 124315 AGCGTGTCGAAGCCAACGCAGAATGGACACTCATGTGCCCCAATGAGTGCCCTGGTCTCG 124374
Query 94370 CCGACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAA 94427
| || || | || | || || || || |||| | || ||||| | | ||| |
Sbjct 124375 CTGATGTGTACGG-TGACGAGTTCGAGGAGCTGTACACCCGCTACGAGAGAGAAGGTCGT 124433
Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
|| | | || | | ||| ||| | ||| || ||| |||| | ||| ||
Sbjct 124434 GGAC-GTGAGACTGTCCGCGCTCAAAAGGTCTGGTATGCTATCTTGGAAGCCCAGACTGA 124492
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
||| ||| || | ||| | | |||||| ||| |||| |||| ||||||| || |
Sbjct 124493 GACTGGTGGACCTTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAA 124552
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
|||||| ||||||||| || || ||||||| ||||| | ||||| || | || ||
Sbjct 124553 CCTCGGAACGATCAAGAGTTCCAACTTGTGCACTGAGATCATTGAGTACACCGCACCAGA 124612
Query 94608 CGAGATTGCTGTGTGTAACCT 94628
|||| | || ||||| |||||
Sbjct 124613 CGAGGTCGCCGTGTGCAACCT 124633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494711172042200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |