Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq411 159 4e-34
seq680 114 2e-20
seq638 91.5 2e-13
>seq411
Length=240905
Score = 159 bits (176), Expect = 4e-34
Identities = 1123/1787 (63%), Gaps = 63/1787 (4%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
|||||||||| || | | ||| | || |||||||||||||| || ||||| || |
Sbjct 125550 TGAACTGAATCGGAGCAGACGCGGCTTGTGTACGGAGGTAGTACATGCCGGTCTTCAGGC 125491
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT-TCCATG 115644
| |||||||| || | ||||| || | |||| | || ||| || | || |
Sbjct 125490 CAAGCTTCCAGCCAGTAAAGTGCATGCTGGTGATCTTGCCCA-TGGTGGGCTCCTTCAAG 125432
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
|| ||||| ||||| ||||||||||||||| || || ||||| ||||| | ||
Sbjct 125431 TGGATGTTCAAGCTTTGAGATTGATCGATGAAGGCACCGCGGTCCGCGGCCATTTGAA-- 125374
Query 115705 ACATCCTTCATCT---TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761
|| || || |||||||||| ||||| |||| | ||| | || || ||
Sbjct 125373 -CAATGTTGCGCTGACTGATTTCCCAGACAGTCTTGTACAACGCCTTGAGGTCGTCCGGA 125315
Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTT 115821
|| | | || ||| | || || || | || ||| | | |||||| | ||
Sbjct 125314 ATGTTCGGAATGCGTTGCACGGAACCGCCGTCGGCGATGATGCGGTTCTTCATGTTCTCA 125255
Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAA 115877
||||| | ||| | |||||||| || | | | | ||||| || ||
Sbjct 125254 GACCACAATCCACGGTCGACGAGATCCTTCAGCAACCATGGG----TTGACGACTTGGAA 125199
Query 115878 CTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCAT 115936
|| || || || || | ||| ||||||||| | ||||||||||| |||||||| |
Sbjct 125198 TTCTCCGGCAAGCACACGACG-AGAGTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGT 125140
Query 115937 TGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGC 115996
|| |||| ||| || | ||||||||| || ||||| ||||| | |||||| |||||
Sbjct 125139 TGAAGCCCATGATCTGCGATGTGGAGGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGC 125080
Query 115997 GGAGACCCACCCCCCTAATGCGTTC-----CTTGAGGGCGTCCCAGTCGTAGTTGAGCTT 116051
||| |||| || | ||| || |||||| ||||||||||| || || |
Sbjct 125079 GGA----CACCGTGCTGA-GCGATCTTGGCCTTGAGCGCGTCCCAGTCCCAG---AGGTC 125028
Query 116052 TG----TCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCT 116107
|| | | | | ||||||| || |||| || || | || | || || ||||
Sbjct 125027 TGAAGGTGTGACGC-CCCACATCTCGTACTGAAGTTCGCCCTTTGAAACCGGGGAGCCCT 124969
Query 116108 CAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTCGCCTCGAGGGCTGC 116165
| | ||||| ||||| || | | | | || | ||| | || ||| || ||
Sbjct 124968 CGTACGTCTCGTATGGACCA--AGCTTGCTAGCAAGGTCGCACGATGCGGTGAGCGCAGC 124911
Query 116166 GTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACG 116224
||| || || ||||| || || | | |||| || | |||||| || ||||| |
Sbjct 124910 GTGGTAGATGGTCTCGAAGATCTGGACGTTCAGGTGACG-GGCCTCTGGAGACTCAAAAG 124852
Query 116225 CGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGAT 116284
| || | || |||| || ||||| ||||||||| || ||||| | |
Sbjct 124851 GCATGCGTAGAGCCAGGAAAGCATCAGCAAGACCGCTGACACCGAGACCGATTGGTCTGT 124792
Query 116285 GTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCC 116341
| | ||| || ||| || ||| ||| || || || ||||| | |
Sbjct 124791 GGCGCATGTTGCTCTTCTTCGC---CTCAGGCACTGGGTAGTGGTTGACTTCGATGATCT 124735
Query 116342 TATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGC 116401
| || | || |||||||| || | | || || ||||| || | || |||| ||
Sbjct 124734 TGTTCAAGTTCTTGGTGACGACTTGCACAACCTCGTGGAGCTTCTCAAAGTCGAAAC-GC 124676
Query 116402 GAGT-CTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTC 116460
|| ||| || ||| || | || || || | || || || || ||||| | | |
Sbjct 124675 TCGTTCTCAAGATCGACGTAGGTTGGCAGAGCAAGAGATGCAAGGTTGCACACGGCGACC 124616
Query 116461 TCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCC 116520
|| || | |||||||| || || || || ||||| || |||||||| || || ||
Sbjct 124615 TCGTCTGGTGCGGTGTACTCAATGATCTCAGTGCACAAGTTGGAACTCTTGATCGTTCCG 124556
Query 116521 AAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCC 116580
| |||||| || || ||| ||| ||||||||||||||||| | || ||
Sbjct 124555 AGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGTCCACCA 124496
Query 116581 GTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTG 116640
||||| || |||| | | ||||| | ||| || | || | ||||| |
Sbjct 124495 GTCTCAGTCTGGGCTTCCAAGATAGCATACCAGACCTTTTGAGCGCGGACAGTCTCACGT 124436
Query 116641 GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC-CACAGCCTC 116699
| || || || |||||| ||||| || |||| ||||| ||||| ||| | ||
Sbjct 124435 CCACGACCTTCTCTCTCGTAGCGGGTGTACAGCTCCTCGAACTCGTCACCGTACA-CATC 124377
Query 116700 TGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCG 116759
| ||| || || || || || || | ||| | ||||| | | || || ||
Sbjct 124376 AGCGAGACCAGGGCACTCATTGGGGCACATGAGTGTCCATTCTGCGTTGGCTTCGACACG 124317
Query 116760 CTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC 116819
||||||||| || ||||||||||| || || |||| ||||| || || |||| ||
Sbjct 124316 CTTCATGAACAGATCTGGGATCCAAAGAGCGAAGAACAGATCACGTGCACGCACTTCCTC 124257
Query 116820 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 116879
| || || || || | |||| ||| |||| ||| |||||||| || || ||
Sbjct 124256 CTTTCCGTGGTTCTTGCGGAGGTCCATGAAGGAGATGACATCTGCGTGCCATGGCTCTAG 124197
Query 116880 GTACACCGCGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGT 116933
||| | |||| | || |||| ||| | |||| ||||| | || ||
Sbjct 124196 GTAGATGGCGAACGCGCCAGGACGCTTG---TTGCCACCTTGGTCGACATAGCGGGCAGT 124140
Query 116934 TGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT 116993
|| | ||||| | ||| || |||| ||||| ||| ||| ||||| || |||
Sbjct 124139 GTTATTGTAGACGCGCAACATCGGGATGAGACCATTGGATGTGCCGTTTGTGCCTGCAAT 124080
Query 116994 ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGA 117053
|| | || | || | |||| || || |||||||| || || ||| ||
Sbjct 124079 GTATGATCCAGTAGCACGGATCTTGTGGCAGTTCAGGCCAATACCACCAGCATTCTTCGA 124020
Query 117054 GATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGC 117113
||| ||||| | | || || ||||||| || || || |||| |||| | |
Sbjct 124019 GATCATGGCGCAAGTCTTCAGTGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTC 123960
Query 117114 GATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGT 117173
||| | |||||| | || |||| | || ||||||||| |||| || || || |
Sbjct 123959 GATCAAGAAGCATGAAGCCAACTGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGA 123900
Query 117174 CGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGT 117232
||||| |||| || | | ||||| | | ||||||||| | | | | || |
Sbjct 123899 AGCGTGTGTGAA-GTATTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATAT 123841
Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279
| || ||||| || || | | || ||||| | ||||| || |||
Sbjct 123840 CGTCGCCGTGGATTCCAACAGCCACACGCATGATCATGTGCTGTGGT 123794
>seq680
Length=821847
Score = 114 bits (126), Expect = 2e-20
Identities = 284/428 (66%), Gaps = 20/428 (5%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| ||||| || |||| ||| ||||||||
Sbjct 341148 GTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 341089
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA-AATTGTTGGCACCCCAATCTGTTTGAGGAGAC 127349
|| || || ||||| | | ||| | || | |||| || | | || || |
Sbjct 341088 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCAAGAGCGAGC-AGCAGTC 341030
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
| || | ||| |||||||||||| |||| || || |||||| |||| || |
Sbjct 341029 GGTCAGCGACAAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGCGC 340970
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
| || || || || | ||| | | ||||||| | || || ||| ||||||
Sbjct 340969 AAGGCAGAGCATCGGTCAAGAATTCTTGCTCAATGGCAACGGCCTCC---ACGATG---- 340917
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGA----AGAGTTCCACAG----- 127520
|| | | ||| | | | | | |||||| |||| | |||
Sbjct 340916 --ATGCTTTGCACGACCGACTTGGCGGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCAAG 340859
Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580
| || || ||| | |||||||||||||||||||| || || |||||| || || |
Sbjct 340858 CGAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAG 340799
Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640
||||||||| ||||||||||||||||| || | |||||||| ||||||||||| |
Sbjct 340798 CCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGAGCCGGAGAAGAAGATAC 340739
Query 127641 CCTCCACA 127648
|||| |||
Sbjct 340738 CCTCGACA 340731
>seq638
Length=503197
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 177654 TCATATTGTTGTTCCATTTCTGTGTGTAACACTGCTTTGTCTCCCCATCCTTGATCACGA 177713
|||| || ||| |||| |||| |||| | |||||| |||| ||| || | |
Sbjct 187069 TCATGTTCTTGCGCCATGTCTGCTTGTAGCGCTGCTTGGTCTTTGAGTCCACAGTCTCCA 187010
Query 177714 TGGAAAACTCCGAGGAGTAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAA 177773
| || || | ||||||||||| || | || |||||||| || || || ||||||
Sbjct 187009 GGTGGAATTCAGTCGAGTAGATGTTGGTGAGTTTTGCACCGTATCCGTTTCGCCCACCAG 186950
Query 177774 CAATTCTCTTCTTGTT-GTCATCGTAGTTTGTACTCGTGAGAAGGTGACCAAAGGTAAGT 177832
| | | | ||| || ||| |||||||| | | || ||||| || |||||| | |
Sbjct 186949 TGACTTT-TGCTTCTTCGTCGTCGTAGTTGGAAGATGTCAGAAGATGCCCAAAGATCATC 186891
Query 177833 TCTGGATTCCAAATACCCTCCTTTTCGTGCAT 177864
|||||| |||| ||||||||||| ||||||||
Sbjct 186890 TCTGGAATCCAGATACCCTCCTTCTCGTGCAT 186859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613492284106200
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