Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq411 102 1e-16
>seq411
Length=240905
Score = 102 bits (112), Expect = 1e-16
Identities = 422/647 (65%), Gaps = 24/647 (4%)
Strand=Plus/Minus
Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCC-GTACATGTGCATGGAAGACAG 203943
|| ||||||||||||||||| ||||| || ||| || ||| | ||||||| | |
Sbjct 125515 AGGTAGTACATGCCGGTCTTCAGGCCAAGCTTCCAGCCAGTAAA-GTGCATGCTGGTGAT 125457
Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003
|||| || | |||| || || ||| ||||||| || ||| |||||||| ||
Sbjct 125456 CTTGCCCATGGTGGGCTCCTTCAAGTGGATGTTCAAGCTTTGAGATTGATCGATGAA-GG 125398
Query 204004 CGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGA 204062
| || || || |||||||| | | |||| | ||| || ||||| || ||||||
Sbjct 125397 CACCGCGGTCCGCGGCCATTTGAACAATGTTGCGCTGACTGATTTCCCAGACAGTCTTGT 125338
Query 204063 ACA-CGTCTCTGGTGTGTTGAGGCACATCTTCCCA---CGTCCTGATCG-AGCCGTTGTC 204117
||| || || || || | || | | ||| | ||| || || | ||| |||
Sbjct 125337 ACAACGCCT-TGAGGTCGTCCGGAA--TGTTCGGAATGCGT--TGCACGGAACCGCCGTC 125283
Query 204118 GGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCAC 204177
||| || | | || || | | ||| ||||| || || || ||| ||
Sbjct 125282 GGCGATGATGCGGTTCTTCATGTTCTCAGACCACAATCCACGGTCGACGAGATCCTTCAG 125223
Query 204178 CAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTT 204237
|| ||||||| || || || ||||||| ||||| | || | | | | |||| |
Sbjct 125222 CAACCATGGGTTGACGACTTGGAATTCTCCGGCAAGCACACGACGAGAGTAGATGTTGCT 125163
Query 204238 GGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCAT 204297
||| |||| ||||| ||||||| ||| | ||||| | ||| ||| || |||||
Sbjct 125162 AGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGATGTGGAGGCAGTAGGCAT 125103
Query 204298 GGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGT 204357
|| || | || ||||||||||| ||||||| | || | || ||| || | |
Sbjct 125102 TGGTGCAACCAGAAGGGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTGAGCGCGTC 125043
Query 204358 CCAGTCGTGCATCGCACTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCC--TT 204413
|||||| || | ||| ||| | ||||||||||| ||| |||||| ||| ||
Sbjct 125042 CCAGTC--CCAGAGGTCTGAAGGTGTGACGCCCCACATCTCGTACTGAAGTTCGCCCTTT 124985
Query 204414 GACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCT-GCCAGCTTGCAC 204472
|| || ||| ||||| ||||||| || || | || | || || || | ||||
Sbjct 124984 GA--AACCGGGGAGCCCTCGTACGTCTCGTATGGACCAAGCT-TGCTAGCAAGGTCGCAC 124928
Query 204473 GAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519
|| |||| | || | ||| |||||||| |||||||| |||||
Sbjct 124927 GATGCGGTGAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGGACGTT 124881
Score = 95.1 bits (104), Expect = 2e-14
Identities = 405/629 (64%), Gaps = 12/629 (2%)
Strand=Plus/Minus
Query 205070 GTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGA 205129
||||||||| || | || || ||||||||| || || || || || | |||||
Sbjct 124411 GTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGG 124352
Query 205130 CACATCAGAGACCACATCTGA-TCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCA 205188
||||| || | ||| |||| | | ||| || | || ||| ||||| || ||||||
Sbjct 124351 CACATGAGTGTCCAT-TCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCA 124293
Query 205189 CAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTC 205248
|| || | ||||||||||| || | | | | || | ||| ||||||| | |||
Sbjct 124292 AAGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTC 124233
Query 205249 CAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGG 205305
|| ||| | ||| || |||||||| ||||||| | | ||| | ||||| ||
Sbjct 124232 CA-TGAAG--GAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGG 124176
Query 205306 CCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGG 205365
| |||||| ||||| ||||| || ||| | | ||| | || |||| ||||||
Sbjct 124175 ACGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGG 124116
Query 205366 CACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCACGTT 205425
| ||||| |||| || ||||| |||| ||| || || ||| | | ||
Sbjct 124115 GATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTT 124056
Query 205426 GGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC-ACTCTTGCAGAG 205484
| | | | |||||| || |||| | ||| | |||| ||||| | |||| ||| |
Sbjct 124055 GTGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTT-CAGTG 123997
Query 205485 TGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-ACCAGATAGCACGAAGCCAGC 205543
|| |||||| || | ||| || ||| || |||| | || |||| ||||||| |
Sbjct 123996 TGTCGTAGATACCCTCAATGCTGTCATCCTTCA-TGTCGATCAAGAAGCATGAAGCCAAC 123938
Query 205544 TTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCGCTTCTCG 205603
| ||| || || ||| ||| || || || ||||| ||||| || |
Sbjct 123937 TGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTC 123878
Query 205604 CTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATACCTATGGCG 205663
|| | |||||||||| | || ||| | |||| |||||| || || | ||
Sbjct 123877 GACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCC 123818
Query 205664 ATCCTCATGAAGAGGTGTTGAGGTCTCTC 205692
| | ||||| | ||| || ||||||||
Sbjct 123817 ACACGCATGATCATGTGCTGTGGTCTCTC 123789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795135867789200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |