Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq411 219 5e-52 seq680 113 6e-20 >seq411 Length=240905 Score = 219 bits (242), Expect = 5e-52 Identities = 1114/1752 (64%), Gaps = 59/1752 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || | || ||||| || || ||||| || | | Sbjct 123795 CCACAGCACATGATCATGCGTGTGGCTGTTGGAATCCACGGCGACGATATCGAGGCCGCC 123854 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || | ||||| |||| ||||| | || || || ||| Sbjct 123855 ATTGAGACCTACAACTACATGTCGAACAAATACTTCACACACGCTTCGCCTACACTGTTC 123914 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 | ||||||||| || | | || || | || ||| | || | | ||||| || Sbjct 123915 AGCGCTGGTACGCCGAATGCACAGTTGGCTTCATGCTTCTTGATCGACATGAAGGATGAC 123974 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGGGC 111847 || | || || |||| ||| |||||| || ||| ||||| ||| || Sbjct 123975 AGCATTGAGGGTATCTACGACAC----ACTGAAGACTTGCGCCATGATCTCGAAGAATGC 124030 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 ||||||||| || || || ||| | || | || | || ||| ||| || Sbjct 124031 TGGTGGTATTGGCCTGAACTGCCACAAGATCCGTGCTACTGGATCATACATTGCAGGCAC 124090 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||| || ||| ||||| | || || ||| | ||||| | || ||| || ||||| Sbjct 124091 AAACGGCACATCCAATGGTCTCATCCCGATGTTGCGCGTCTACAATAACACTGCCCGCTA 124150 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 ||| |||||| ||| ||||| || | |||| |||| || |||||||| Sbjct 124151 TGTCGACCAAGGTGGCAACAAGCGTCCT---GGCGCGTTCGCCATCTACCTAGAGCCATG 124207 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| ||| |||| ||| | || | || ||||| || | ||||| | ||| Sbjct 124208 GCACGCAGATGTCATCTCCTTCATGGACCTCCGCAAGAACCACGGAAAGGAGGAAGTGCG 124267 Query 112082 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 ||| || ||||| |||| |||||| ||||| |||||||| ||||||||| | || || | Sbjct 124268 -TGCACGTGATCTGTTCTTCGCTCTTTGGATCCCAGATCTGTTCATGAAGCGTGTCGAAG 124326 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 | | | ||| | ||| | || || | || || |||||| | |||| | Sbjct 124327 CCAACGCAGAATGGACACTCATGTGCCCCAATGAGTGCCCTGGTCTCGCTGATGTGTACG 124386 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC-TGCGACG 112259 |||| ||||| || | || ||||| |||||| |||| |||| | ||| || ||| Sbjct 124387 GTGACGAGTTCGAGGAGCTGTACACCCGCTACGAGAGAGAAGGTCGTG-GACGTGAGACT 124445 Query 112260 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 || | ||| | || ||| | ||||| | | | || || ||||||||| ||| Sbjct 124446 GTCCGCGCTCAAAAGGTCTGGTATGCTATCTTGGAAGCCCAGACTGAGACTGGTGGACCT 124505 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| || || |||| ||||| || || ||||| | || |||| Sbjct 124506 TTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGAACGATC 124565 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 |||||||||||| | || || || ||| | || | || | ||| ||| || ||| Sbjct 124566 AAGAGTTCCAACTTGTGCACTGAGATCATTGAGTACACCGCACCAGACGAGGTCGCCGTG 124625 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 112499 || ||||| ||||| | ||||| || | || || |||| |||| || || || Sbjct 124626 TGCAACCTTGCATCTCTTGCTCTGCCAACCTACGTCGATCTTGAGAACGAGCGTTTCGAC 124685 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | ||| || |||||||| ||| | || ||||| || ||| | |||| | || || Sbjct 124686 TTTGAGAAGCTCCACGAGGTTGTGCAAGTCGTCACCAAGAACTTGAACAAGATCATCGAA 124745 Query 112560 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 || ||||| || |||| || || || ||| | ||| | ||||| Sbjct 124746 GTCAACCACTACCCAGTGCCTGAG---GCGAAGAAGAGCAACATGCGCCACAGACCAATC 124802 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 112676 |||||||||||| ||||| || |||| ||| | | ||| | ||||| || Sbjct 124803 GGTCTCGGTGTCAGCGGTCTTGCTGATGCTTTCCTGGCTCTACGCATGCCTTTTGAGTCT 124862 Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAG 112736 || || | | || | | || || ||||| || || ||||| || || Sbjct 124863 CCAGAGGCCCGTCACCTGAACGTCCAGATCTTCGAGACCATCTACCACGCTGCGCTCACC 124922 Query 112737 GC-GAGTTCGGAGTTGGCAG-AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 || || || ||| || | | | ||||||||| || || | ||||| || || | Sbjct 124923 GCATCGTGCGACCTTGCTAGCAAGCT--TGGTCCATACGAGACGTACGAGGGCTCCCCGG 124980 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-----CTA 112849 |||| | || | ||||| | || ||||||| | | | | ||||| || Sbjct 124981 TTTCAAAGGGCGAACTTCAGTACGAGATGTGGG-----GCGTCACACCTTCAGACCTCTG 125035 Query 112850 CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 ||||||||||| ||||||| ||| || | ||| | || ||| ||| || | Sbjct 125036 GGACTGGGACGCGCTCAAGGCCAAGATCGCTCAGCACGGTGTCCGCAACTCCCTTCTGGT 125095 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 ||||||||||| || |||||||| | || ||| |||| || || ||||| || || Sbjct 125096 TGCACCAATGCCTACTGCCTCCACATCGCAGATCATGGGCTTCAACGAGTGCTTCGAGCC 125155 Query 112970 CTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 113028 ||||| | |||||||| ||| | | || || ||||| || | |||||| Sbjct 125156 ATACACTAGCAACATCTACTCT-CGTCGTGTGCTTGCCGGAGAATTCCAAGTCGTCAAC- 125213 Query 113029 AGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 113086 ||| | || | || ||| || ||| | ||||| || | |||||| | | Sbjct 125214 -CCATGGTTGCTGAAGGATCTCGTCGACCGTGGATTGTGGTCTGAGAACATGAAGAACCG 125272 Query 113087 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 ||| | | || |||||| | ||| ||| | | ||||| || || | ||| Sbjct 125273 CATCATCGCCGACGGCGGTTCCGTGCAACGCATTCCGAACATTCCGGACGACCTCAAGGC 125332 Query 113147 GTTGTACCGCACAGTTTGGGAAATCA---AGATGAAGGATGTCATTGACATGGCCGCAGA 113203 ||||||| || || |||||||||| || || || || | |||||||| || Sbjct 125333 GTTGTACAAGACTGTCTGGGAAATCAGTCAGCGCAACATTG---TTCAAATGGCCGCGGA 125389 Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCA-TGGAAAG-TCCAACG 113261 || ||| |||||| |||||| |||||| |||| || || | ||| | || || Sbjct 125390 CCGCGGTGCCTTCATCGATCAATCTCAAAGCTTGAA--CATCCACTTGAAGGAGCCCACC 125447 Query 113262 ATGTCCAAGCTCTCTTCTATGCACATGTAC-AGTTGGAAGAAGGGTCTCAAAACGGGGAT 113320 ||| |||| || | |||||| | ||| | |||||| || || || || || || Sbjct 125448 ATGGGCAAGATCACCAGCATGCAC-TTTACTGGCTGGAAGCTTGGCCTGAAGACCGGCAT 125506 Query 113321 GTATTACCTCCG 113332 ||| |||||||| Sbjct 125507 GTACTACCTCCG 125518 >seq680 Length=821847 Score = 113 bits (124), Expect = 6e-20 Identities = 302/453 (67%), Gaps = 14/453 (3%) Strand=Plus/Plus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 || ||| |||| | |||| ||||| ||| ||||||||||||||||| || || ||| Sbjct 340702 TTCGCTATGCGATTGATCGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTC 340761 Query 102234 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 ||| | || | ||| | |||||||| ||||||||| | || ||| |||||||||||| Sbjct 340762 -GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGA 340820 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATTA 102350 ||| ||||| ||||||||||| | ||| || || || | | || || | Sbjct 340821 GCTCATCTCCCGTGACGAGGGCATGCACACTGACTTCGCTTGCCTGCTGTTCTCTCA-CC 340879 Query 102351 TTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATT 102410 | | | | || | | | | | | || || | ||| ||||||| ||| Sbjct 340880 TCAAGAACAAGCCCGCCAAGTCGGTC-GTGCAAAGCATCATCGTGGAGGCCGTTGCCATT 340938 Query 102411 GAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAG 102470 ||| | | |||| | ||||| || || ||||| || |||| ||||| || | Sbjct 340939 GAGCAAGAATTCTTGACCGATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTC 340998 Query 102471 ATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA 102530 |||| | | || ||||||| ||| |||| || || || | || | || ||| Sbjct 340999 ATGTGCCAGTACATTGAGTTTGTCGCTGACCGACTGCTG--CTCGCTCTTG--GCAACCA 341054 Query 102531 A----TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAA 102586 | | | ||| ||| || || || ||||||||||||||||| |||| ||| || Sbjct 341055 AAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAA 341114 Query 102587 GACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619 ||| ||||||||||| ||| | ||||| ||||| Sbjct 341115 GACCAACTTCTTCGAGAAGCGTGTTGGCGACTA 341147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620727308200400