Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq411 206 3e-48 >seq411 Length=240905 Score = 206 bits (228), Expect = 3e-48 Identities = 1095/1720 (64%), Gaps = 59/1720 (3%) Strand=Plus/Minus Query 109510 TGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGG 109566 ||||| ||||||||||| ||| || || || ||||| | | ||| | | || | Sbjct 125416 TGAGATTGATCGATGAAGGCACCGCGGTCCGCGGCCATTTGAACAATGTTGCGCT---GA 125360 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 || ||||||||||||||||||||||| ||||| || || ||||||| | ||| | Sbjct 125359 CTGATTTCCCAGACAGTCTTGTACAACGCCTTGAGGTCGTCCGGAATGTTCGGAATGCGT 125300 Query 109627 TGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACC 109686 || | || || || | | ||| | | |||||| | | ||||| | || Sbjct 125299 TGCACGGAACCGCCGTCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAATCCACGG 125240 Query 109687 TTTTTGAGATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGC 109744 | |||||| | || ||| ||| |||||| || ||||| || ||||| | Sbjct 125239 TCGACGAGATCCTTCAGCAACCATGG--GTTGACGACTTGGAATTCTCCGGCAAGCACAC 125182 Query 109745 GTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTG 109804 | || ||||||||| | ||||| || ||||| ||||| ||| ||| | ||| || | Sbjct 125181 GACGAGAGTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCG 125122 Query 109805 CAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTA 109864 ||||| || || ||||| || || | ||||| ||| |||| ||| | | | Sbjct 125121 ATGTGGAGGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGCGGACACCGTGC-----TG 125067 Query 109865 CCCGCTCACG-CATTG----CGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATC 109919 || || | | ||| ||||||| || | || || || | || | || Sbjct 125066 AGCGATCTTGGCCTTGAGCGCGTCCCAGTCCCA--GAGGTCTGAAGGT-GTGACGCC--- 125013 Query 109920 CCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGA 109979 |||||| || |||||| | |||| | | | || || |||| | | ||||||| | Sbjct 125012 CCACATCTCGTACTGAAGTTCGCCCTTTGAAACCGGGGAGCCCTCGTACGTCTCGTATGG 124953 Query 109980 CCCCTCAACCTCG---GCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036 || || || | || | ||| | || || || || || || || || ||||| Sbjct 124952 ACC---AAGCTTGCTAGCAAGGTCGCACGATGCGGTGAGCGCAGCGTGGTAGATGGTCTC 124896 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAAT 110096 || || || | |||| | | || | |||| | | || || || | | | | Sbjct 124895 GAAGATCTGGACGTTCAGGTGACGGGCCTCTGGAGACTCAAAAGGCATGCGTAGAGCCAG 124836 Query 110097 AAACACATCCGCTAGACC-CTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 || |||| || ||||| |||| |||||||||| || || | || |||||| | | Sbjct 124835 GAAAGCATCAGCAAGACCGCTGA-CACCGAGACCGATTGGTCTGTGGCGCATGTT-GCTC 124778 Query 110156 GTCGA-GCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTC 110214 || || || ||||| |||| ||||||| | || | ||||| || Sbjct 124777 TTCTTCGCCTCAGGCACTGGGTAGTGGTTGACTTCGATGATCTTGTTCAAGTTCTTGGTG 124718 Query 110215 ACAGTCTT-CGTGATTTCATGGAGTTTGTCGTAATCGAA-CGTTTTCGT-CTCCTTATTG 110271 || | ||| | | || ||||| || || | ||||| || | ||| ||| || | Sbjct 124717 AC-GACTTGCACAACCTCGTGGAGCTTCTCAAAGTCGAAACGCT--CGTTCTCAAGATCG 124661 Query 110272 ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTG 110331 || || | || ||||||| ||| ||||| |||||||| | ||||||| ||||| Sbjct 124660 ACGTAGGTTGGCAGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTG 124601 Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391 || || | || || || ||||||||||||||||| || || | ||||||||| || Sbjct 124600 TACTCAATGATCTCAGTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTG 124541 Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451 ||| |||| |||||||| ||||||||| | || |||||| || ||||| | Sbjct 124540 CTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCT 124481 Query 110452 TTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCC 110511 | | || || | ||| || | ||| ||||||| | | ||||||| | Sbjct 124480 TCCAAGATAGCATACCAGACCTTTTGAGCGCGGACAGTCTCACGTCCACGACCTTCTCTC 124421 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 ||||| |||||||| ||||| || || | ||||||||||||| ||||| | Sbjct 124420 TCGTAGCGGGTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCAC 124361 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | | ||| || | ||| | ||| | | | | || || | |||||||||||| || Sbjct 124360 TCATTGGGGCACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCT 124301 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 || ||||| | || |||| || ||||| ||| | || || | || ||||| | Sbjct 124300 GGGATCCAAAGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTG 124241 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 || || |||| ||| |||| ||| | ||||||||| || || |||| |||| | Sbjct 124240 CGGAGGTCCATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCG 124181 Query 110752 CCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 || | |||| || | |||| |||||||| || ||| |||| |||| | Sbjct 124180 CC---AGGACGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGC 124124 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 | ||| || || | |||| |||| || ||||| || ||| || | | ||| Sbjct 124123 AACATCGGGATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCA 124064 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT--TTGTGCACACT 110923 || || | |||| | || ||||||||||| || ||| || | | ||| | | Sbjct 124063 CGGATCTTGTGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCA-AGT 124005 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 || | ||||| | || ||||| ||||| || |||| || | || | ||||| | Sbjct 124004 CT-TCAGTGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATG 123946 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043 ||| || ||| | | ||||| || || |||| |||||||| | || || ||| | Sbjct 123945 AAGCCAACTGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGA--A 123888 Query 111044 GACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAAT 111101 | ||| ||||| | |||||| || || | |||| | ||| | ||||| || Sbjct 123887 GTATTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGAT 123828 Query 111102 ACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACG 111161 |||| || || ||||||| ||| | || || | ||| | || ||||||| || Sbjct 123827 TCCAACAGCCACACGCATGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGCG 123768 Query 111162 CTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 | | ||| || || ||||||| |||||||||| Sbjct 123767 GAGCAAGTATGAGCGTTCCAGCGTCTTGAAACCAAAGTAT 123728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961680521000