Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq411 152 6e-32
seq680 109 6e-19
>seq411
Length=240905
Score = 152 bits (168), Expect = 6e-32
Identities = 566/878 (64%), Gaps = 17/878 (2%)
Strand=Plus/Minus
Query 106444 ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 106503
|| ||| || |||| || || | ||||| | ||||| || || ||| || |
Sbjct 124664 ATCGACGTAGGTTGGCAGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGC 124605
Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 106563
|||||||| | || || || ||||||||||||||||| ||||| || | ||||| ||
Sbjct 124604 GGTGTACTCAATGATCTCAGTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTG 124545
Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623
||| ||||| |||| |||||||||||||||||| | || || ||||| |||||
Sbjct 124544 GTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTG 124485
Query 106624 TGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTC 106683
| | | || || | ||| || | || | ||| | | | || || ||
Sbjct 124484 GGCTTCCAAGATAGCATACCAGACCTTTTGAGCGCGGACAGTCTCACGTCCACGACCTTC 124425
Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743
|||||| ||||| || | || ||||| ||||| | | || | |||||| ||
Sbjct 124424 TCTCTCGTAGCGGGTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGG 124365
Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803
|| | || || | || | ||||| | | || || ||||||||||| ||
Sbjct 124364 GCACTCATTGGGGCACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAG 124305
Query 106804 GTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGT 106862
||||| ||||| || | | || ||||| | | ||| | | || || | || ||||
Sbjct 124304 ATCTGGGATCCAAAGAGCGAAGAACAGATCACGTGCACGCA-CTTCCTCCTTTCCGTGGT 124246
Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922
| || | || | ||| |||| ||| |||||||||||||| || |||| ||||
Sbjct 124245 TCTTGCGGAGGTCCATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGA 124186
Query 106923 TAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976
| || ||||| ||| |||| | |||||||| || ||| || | |
Sbjct 124185 ACGCGCCAG---GACGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGA 124129
Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 107036
|||| | ||| || || | ||||| ||| || ||||| || ||| ||| |
Sbjct 124128 CGCGCAACATCGGGATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAG 124069
Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGC 107094
| || | | | ||| || || |||||||| ||||| ||| ||||| | ||||
Sbjct 124068 TAGCACGGATCTTGTGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGC 124009
Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154
| | || | || || | |||||||| | || ||| ||||| || |||| | |||
Sbjct 124008 A-AGTCT-TCAGTGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAA 123951
Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214
||| | || ||| | | || |||||||| |||| || || || | ||||| |
Sbjct 123950 GCATGAAGCCAACTGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGT 123891
Query 107215 GAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 107273
||| || | | ||||| | || ||| ||||| | | | | || || || || ||||
Sbjct 123890 GAAG-TATTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGT 123832
Query 107274 GGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311
|||| || | ||||||||||| | ||||| || |||
Sbjct 123831 GGATTCCAACAGCCACACGCATGATCATGTGCTGTGGT 123794
>seq680
Length=821847
Score = 109 bits (120), Expect = 6e-19
Identities = 292/439 (67%), Gaps = 22/439 (5%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| |||||||| |||||||||||||| || | || ||||| |||||
Sbjct 341147 TAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCATG 341088
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA----TGGGTGGCACCCCAACTTGTTTGAGGAG 117101
||||| || || || | ||||| | | | ||| || ||| || ||
Sbjct 341087 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGC----CAAGAGCGAGCAGCAG 341032
Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT 117161
|| || | ||| |||||||||||| | |||| || || |||||| |||| ||
Sbjct 341031 TCGGTCAGCGACAAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGC 340972
Query 117162 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG-- 117219
|| || || || || | ||| ||| |||||| |||| ||||| |||||||
Sbjct 340971 GCAAGGCAGAGCATCGGTCAAGAATTCTTGCTCAATGGCAACGGCCTC---CACGATGAT 340915
Query 117220 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGA-AGAGCTCCACG---GC 117275
|| | | | | | || || | | | || || ||| | || | ||
Sbjct 340914 GCTTTGCACGACCGACTTGGCGGGCTTGTTCTTGAGGT---GAGAGAACAGCAGGCAAGC 340858
Query 117276 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGG 117335
|| || ||| | ||||| || ||||| || || || || |||||| ||||| |
Sbjct 340857 GAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGC 340798
Query 117336 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 117394
||||||||| |||||||||||||| | || | ||| |||||| ||||||||||||||||
Sbjct 340797 CATGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAATGAGCCGGAGAAGAAGATAC 340739
Query 117395 CCTCCACACACGCAAACGC 117413
|||| ||| ||||| ||
Sbjct 340738 CCTCGACAGCAGCAAAGGC 340720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589966456091800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |