Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq560 120 4e-22 >seq560 Length=1186090 Score = 120 bits (132), Expect = 4e-22 Identities = 269/399 (67%), Gaps = 14/399 (4%) Strand=Plus/Plus Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453 |||||||| |||||||| || || || |||||||| || || || | |||||| || ||| Sbjct 880674 TGTTTGATCCCAGAGTCCGCTCACGGCACTAATCCAGCGTCTGCCGCGATGGCCGGCATG 880733 Query 159454 AAAGTTGTAGGTGTCAAGTGTGAT-----GATGATGG-CAACATAGACATCAAAGATCTA 159507 ||||| ||||||| || || || || | | | |||||| |||||| Sbjct 880734 CGCGTTGTGACAATCAAGTGCGACACCAAGAAGACGGGCGATCTTGACATCGCAGATCT- 880792 Query 159508 GAGAAGA--AAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATATCC 159563 |||| ||| | | | |||| || || | | ||| | || || || Sbjct 880793 --GAAGGCTAAGTG-TGAGAAGTACAGCGAGGAGCTTGGCGCTTTCATGGTCACCTACCC 880849 Query 159564 ATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAA 159623 ||| ||| |||||| || || |||| ||| | || | ||||| || || | Sbjct 880850 ATCCACATTTGGTGTCTTCGAGCCAAAGGTCAAGGAAGCCTGCGATATTGTGCACCAGCA 880909 Query 159624 TGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACC 159683 |||||| ||||| || | ||||| ||||| | ||||| ||| | ||||| || Sbjct 880910 TGGTGGACAGGTCTACATGGATGGAGCAAACATGAATGCTCAGATTGGTCTCTGCTCGCC 880969 Query 159684 ATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACA 159743 | | || ||||| ||||| || ||| | ||| | || ||||| ||||| |||||||| Sbjct 880970 ACGCGAGATCGGTGCTGATGTGTGCCATTTGAACCTGCACAAGACCTTCTGCATTCCACA 881029 Query 159744 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 |||||||| ||||||||||| || ||||||||||| || Sbjct 881030 CGGAGGTGGTGGTCCTGGCGTTGGGCCTATTGGTGTTGC 881068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588036903005200