Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq411 86.0 7e-12 >seq411 Length=240905 Score = 86.0 bits (94), Expect = 7e-12 Identities = 227/347 (65%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173 || || | || ||| || || || || ||||||| | | | ||||| || ||||| || Sbjct 124411 GTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGG 124352 Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233 ||||| | || ||| || | | || || | |||| || | |||||| |||||| Sbjct 124351 CACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAA 124292 Query 48234 AGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCA 48293 ||||| | || | ||| | | | | ||| || || || ||| | || || Sbjct 124291 AGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCC 124232 Query 48294 AGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGT 48353 | ||| || | ||| || |||||||| |||| || || || | | || || || Sbjct 124231 ATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGC 124172 Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413 || || || ||||| || | ||| | |||||| || || || || | ||||| |||| Sbjct 124171 TTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATG 124112 Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGC 48460 | |||||| ||| | || || || || | ||| || |||| |||| Sbjct 124111 AGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGC 124065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562095133729800