Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq660 107 2e-18 >seq660 Length=72284 Score = 107 bits (118), Expect = 2e-18 Identities = 234/345 (68%), Gaps = 8/345 (2%) Strand=Plus/Minus Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 || |||||||| ||| ||||||||||||||| | ||||||||| ||| || | | Sbjct 46084 GGATTCCAGGCAGACATGATGATGCGCCTGTCGTAAGGGTTGTTCTTGAGCTTGTGAATG 46025 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165 | | |||||||||||| || || | ||||| | |||| ||||||| Sbjct 46024 ACCTCAGCCAGCTGATCCACTCCTTGTCCAGTATAGTCGGTGTGGCAGTCCTTGTACTCG 45965 Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 || |||||||||||||| ||||||||||| || || || ||||| || ||||| | ||| Sbjct 45964 GCACCGAAATGCCTCCATTGGAACCCGTAGACTGGCCCAAGGTCGCCTTCTTCACGGTGG 45905 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285 | ||| |||| | | |||||||| || || | ||||| || | || | Sbjct 45904 GAAAGGCCGACGCTGTCGAGGTATTCTCTGGATCCATTACCATCCCAAATGTGAACGTTC 45845 Query 30286 T--TCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTG--ACGAACCACAGCAGCTCCTC 30341 | || |||||| |||| | | ||| | | | ||| ||||||||||||||||| | Sbjct 45844 TGGTCCTGGAGAG-TCTTCGCA--TTG-GTATCTGCTGCAACGAACCACAGCAGCTCTGC 45789 Query 30342 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 || || || |||||| | || || || ||||| || || Sbjct 45788 TACCACCGCGCGTAGAAAGACGCGTTTCGTGGTAAGGAGTGGCAA 45744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408607913847485