Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq660 107 2e-18
>seq660
Length=72284
Score = 107 bits (118), Expect = 2e-18
Identities = 234/345 (68%), Gaps = 8/345 (2%)
Strand=Plus/Minus
Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105
|| |||||||| ||| ||||||||||||||| | ||||||||| ||| || | |
Sbjct 46084 GGATTCCAGGCAGACATGATGATGCGCCTGTCGTAAGGGTTGTTCTTGAGCTTGTGAATG 46025
Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165
| | |||||||||||| || || | ||||| | |||| |||||||
Sbjct 46024 ACCTCAGCCAGCTGATCCACTCCTTGTCCAGTATAGTCGGTGTGGCAGTCCTTGTACTCG 45965
Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225
|| |||||||||||||| ||||||||||| || || || ||||| || ||||| | |||
Sbjct 45964 GCACCGAAATGCCTCCATTGGAACCCGTAGACTGGCCCAAGGTCGCCTTCTTCACGGTGG 45905
Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285
| ||| |||| | | |||||||| || || | ||||| || | || |
Sbjct 45904 GAAAGGCCGACGCTGTCGAGGTATTCTCTGGATCCATTACCATCCCAAATGTGAACGTTC 45845
Query 30286 T--TCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTG--ACGAACCACAGCAGCTCCTC 30341
| || |||||| |||| | | ||| | | | ||| ||||||||||||||||| |
Sbjct 45844 TGGTCCTGGAGAG-TCTTCGCA--TTG-GTATCTGCTGCAACGAACCACAGCAGCTCTGC 45789
Query 30342 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
|| || || |||||| | || || || ||||| || ||
Sbjct 45788 TACCACCGCGCGTAGAAAGACGCGTTTCGTGGTAAGGAGTGGCAA 45744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408607913847485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |