Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq411 154 2e-32 seq680 109 7e-19 >seq411 Length=240905 Score = 154 bits (170), Expect = 2e-32 Identities = 890/1402 (63%), Gaps = 47/1402 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| || || | || |||||||| || || || || | | | Sbjct 123795 CCACAGCACATGATCATGCGTGTGGCTGTTGGAATCCACGGCGACGATATCGAGGCCGCC 123854 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | ||||| | | || |||| ||||| | || || || || Sbjct 123855 ATTGAGACCTACAACTACATGTCGAACAAATAC-TTCACACACGCTTCGCCTACACTGTT 123913 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 || |||||||| || | | ||| || | |||||| | |||| || ||||| || Sbjct 123914 CAGCGCTGGTACGCCGAATGCACAGTTGGCTTCATGCTTCTTGATCGACATGAAGGATGA 123973 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCT 75448 | || | |||||||| | || || | | | | ||||| | ||||| ||| ||| Sbjct 123974 CAGCATTGAGGGTATCTACGACACACTGAAG-ACT-TGCGCCATGATCTCGAAGAATGCT 124031 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || |||||||| || || ||| | | | || | | ||| ||| || ||| Sbjct 124032 GGTGGTATTGGCCTGAACTGCCACAAGATCCGTGCTACTGGATCATACATTGCAGGCACA 124091 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || ||| ||||| | || || ||| | ||||| | || ||| || |||||| Sbjct 124092 AACGGCACATCCAATGGTCTCATCCCGATGTTGCGCGTCTACAATAACACTGCCCGCTAT 124151 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | |||| || ||||| | || |||| ||||| | || |||||| Sbjct 124152 GTCGACCAAGGTGGCAACAAGCGTCCTGGCGCGT---TCGCCATCTACCTAGAGCCATGG 124208 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || || ||| |||| ||| | || | || ||||| || | || || | || Sbjct 124209 CACGCAGATGTCATCTCCTTCATGGACCTCCGCAAGAACCACGGAAAGGAGGAAGTGCG- 124267 Query 75683 TGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 || | | ||||| || | | || ||||| ||||| || ||||||||||| || || | Sbjct 124268 TGCACGTGATCTGTTCTTCGCTCTTTGGATCCCAGATCTGTTCATGAAGCGTGTCGAAGC 124327 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 | ||||| | || | || || | || || |||||| | || | | || Sbjct 124328 CAACGCAGAATGGACACTCATGTGCCCCAATGAGTGCCCTGGTCTCGCTGATGTGTACGG 124387 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTG 75860 ||| ||||| || | || ||||| || || ||| || ||| | | || ||||| Sbjct 124388 TGACGAGTTCGAGGAGCTGTACACCCGCTACGAGAGA-GAAGGTCGTGGACGTGAGACTG 124446 Query 75861 TACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | | || | || ||| | ||||| | || | ||||| |||||||| ||| | Sbjct 124447 TCCGCGCTCAAAAGGTCTGGTATGCTATCTTGGAAGCCCAGACTGAGACTGGTGGACCTT 124506 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||||| |||||||||||| ||| ||||| ||||| ||||| | ||||| |||| Sbjct 124507 TCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGAACGATCA 124566 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 |||| || || | ||||| || || | |||||||| | || ||| || || | Sbjct 124567 AGAGTTCCAACTTGTGCACTGAGATCATTGAGTACACCGCACCAGACGAGGTCGCCGTGT 124626 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAG-ACTCGCACTTTTGAT 76099 |||| | ||||| | || || |||| || ||| || ||| || || ||| || Sbjct 124627 GCAACCTTGCATCTCTTGCTCTGCCAACCTACGTCGATCTTGAGAACGAGC-GTTTCGAC 124685 Query 76100 TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159 | ||| || || || || | | | || ||||| || | ||| |||| || Sbjct 124686 TTTGAGAAGCTCCACGAGGTTGTGCAAGTCGTCACCAAGAACTTGAACAAGATCATCGAA 124745 Query 76160 AGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216 || || || || |||| ||| ||| || ||||| |||||||| || Sbjct 124746 GTCAACCACTACCCAGTGCCTGAG---GCGAAGAAGAGCAACATGCGCCACAGACCAATC 124802 Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----TTTG 76271 ||| | ||||| ||||| || |||| ||| || | ||||||| |||| Sbjct 124803 GGTCTCGGTGTCAGCGGTCTTGCTGATG-----CTTTCCTGGCTCTACGCATGCCTTTTG 124857 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | || || ||| | |||| | | ||||| || ||||| || ||||| | | Sbjct 124858 AGTCTCCAGAGGCCCGTCACCTGAACGTCCAGATCTTCGAGACCATCTACCACGCTGCGC 124917 Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGC--CCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 | || || || | ||| ||| | ||| | || ||||| | ||||| || Sbjct 124918 TCACCGCATCGTGCGACCTTGCT--AGCAAGCTTGGTCCATACGAGACGTACGAGGGCTC 124975 Query 76390 TCCCGCGTCCCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACC--AAGCTCAA 76446 |||| | | ||||| | ||||||| || ||||||| || | ||| || | Sbjct 124976 -CCCGGTTTCAAAGGGCGAACTTCAGTACGAGATGTGGG-GCGTCACACCTTCAG-ACCT 125032 Query 76447 CTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 || |||||||| | ||||||| ||| || | ||| | || ||| ||| | Sbjct 125033 CTGGGACTGGGACGCGCTCAAGGCCAAGATCGCTCAGCACGGTGTCCGCAACTCCCTTCT 125092 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | | ||||||||||| || |||||||| | || ||| |||| || || ||||| || Sbjct 125093 GGTTGCACCAATGCCTACTGCCTCCACATCGCAGATCATGGGCTTCAACGAGTGCTTCGA 125152 Query 76567 ACCATACACAACAAACATCTAC 76588 |||||||| | ||||||||| Sbjct 125153 GCCATACACTAGCAACATCTAC 125174 >seq680 Length=821847 Score = 109 bits (120), Expect = 7e-19 Identities = 292/439 (67%), Gaps = 22/439 (5%) Strand=Plus/Plus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTT 65147 || ||||| ||| |||||||||||||||||||| |||||| ||| | || | ||||| Sbjct 340720 GCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTC-GCGTCCATCTTCTGGTT 340778 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207 ||||||||| ||||||||| | ||||| |||||| || || || || ||||| || || Sbjct 340779 GAAGAAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGA 340838 Query 65208 GGGTCTCCACCAGGAGTTTGC---CGTGGAGCTCT-TCAAGACTTTGCGTAATAGACCCA 65263 ||| | ||| || || || | || | ||| || || | | | || || Sbjct 340839 GGGCATGCACACTGACTTCGCTTGCCTGCTGTTCTCTC---ACCTCAAGAACAAGCCCGC 340895 Query 65264 CTACCGAAACTATCCACGC--CATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCAT 65321 | | | | | || ||||||| ||||| |||| |||||| ||| ||| | Sbjct 340896 CAAGTCGGTCGTGCAAAGCATCATCGTG---GAGGCCGTTGCCATTGAGCAAGAATTCTT 340952 Query 65322 CTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACAT 65381 || || || || || || |||| |||||| || || |||| | ||||||| Sbjct 340953 GACCGATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACAT 341012 Query 65382 TGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA----TTTGGAACG 65437 ||||| ||| | || || || || ||| || ||| | | | |||| Sbjct 341013 TGAGTTTGTCGCTGACCGACTGCTGCTCGCTCTTG----GCAACCAAAAGTTCTACAACG 341068 Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497 | | || || || ||||| ||||| ||||| || | || |||||||||||||| | Sbjct 341069 CCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCG 341128 Query 65498 AGAAGCGAGTTGGGGACTA 65516 ||||||| ||||| ||||| Sbjct 341129 AGAAGCGTGTTGGCGACTA 341147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555095901600