Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq456 257 2e-63 seq455 152 7e-32 seq639 127 3e-24 seq671 116 5e-21 seq540 111 2e-19 seq345 111 2e-19 seq638 100 4e-16 >seq456 Length=274388 Score = 257 bits (284), Expect = 2e-63 Identities = 480/703 (68%), Gaps = 3/703 (0%) Strand=Plus/Minus Query 195285 ACATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTAT 195344 ||| |||| | | ||| || ||||||||||| || || || ||||| || || ||| | | Sbjct 84021 ACACAATGGCACCAGCCATCGGTATCGATTTGGGTACCACGTACTCGTGCGTGGGTATCT 83962 Query 195345 GGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGT 195404 | |||| ||| | || || ||| | || ||||| || ||||| ||||| || |||| Sbjct 83961 TCAGAGATGACCGTATCGAAATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGT 83902 Query 195405 ACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA 195464 || ||||| ||||| | || |||||| | || || |||| || || || || | Sbjct 83901 TTGTCGCCTTCACAGACACCGAGCGTCTCATCGGTGACTCCGCGAAGAACCAAGTCGCCA 83842 Query 195465 TGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATA 195524 ||||||| |||| || ||||| ||||| ||||| | || || |||||||| || Sbjct 83841 TGAACCCAGTCAACACAGTCTTCGACGCCAAGCGATTAATCGGACGCAAGTTCAACGACC 83782 Query 195525 AGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATA 195584 | || |||| ||| || ||| ||| | | | ||| | || | ||| | | Sbjct 83781 CAGAGGTGCAAGCCGACATGAAGCACTTCCCCT-TCAAGGTCATC--GACAAGGCCGGCA 83725 Query 195585 AGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTT 195644 ||||| | || | || || || | || || |||| ||| | || ||||| || | Sbjct 83724 AGCCTGTCATCCAAGTCGAGTTCAAGGGCGAAGAGAAGACATTCTCCCCAGAAGAGATCT 83665 Query 195645 CGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGA 195704 | || ||||| | | |||||| ||||| || || || | | | ||| || || | Sbjct 83664 CATCCATGGTCCTCACCAAGATGCGTGAGACCGCAGAGTCATACCTTGGTGGCACCGTCA 83605 Query 195705 AAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGG 195764 | | || ||||| ||||| || || ||||||| || || || |||| || || |||| Sbjct 83604 ACAACGCTGTTGTCACTGTCCCAGCATACTTCAACGACTCGCAGAGACAAGCAACCAAGG 83545 Query 195765 ACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTG 195824 | |||| | ||||| || | ||| || | || ||||| || ||||| || |||| Sbjct 83544 ATGCTGGTCTCATTGCTGGCTTGAACGTGCTCCGTATCATCAACGAGCCAACTGCCGCTG 83485 Query 195825 CAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATC 195884 | ||||| || ||||| |||||||| | || | || || || | ||||| || Sbjct 83484 CCATTGCCTACGGTCTCGACAAGAAGACCGAGGGCGAGCGCAACGTTCTCATCTTCGACT 83425 Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944 | ||||||||||| || |||||||| ||||||| || || | ||||| ||||| || | Sbjct 83424 TGGGTGGTGGTACCTTCGATGTCTCTCTTCTCACAATCGAGGAGGGTATCTTCGAGGTCA 83365 Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || |||| || ||||| || || | |||||||| || ||||| Sbjct 83364 AGTCTACCGCCGGTGACACACACTTGGGTGGTGAGGACTTCGA 83322 >seq455 Length=1194790 Score = 152 bits (168), Expect = 7e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || ||||||||||||||||| ||||| ||||| ||||| ||| |||| | Sbjct 1131191 ACCGGCAAGACTATCACCCTCGAGGTGGAGTCTAGCGACACCATCGACAACGTCAAGTCG 1131132 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| || ||||| |||||||| || || ||||| || || ||||| ||||| || Sbjct 1131131 AAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCATTTTCGCTGGCAAG 1131072 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || || || |||||||| | ||||||||| | || |||||||| || || || Sbjct 1131071 CAACTCGAGGACGGCCGTACCCTGTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAT 1131012 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 1131011 CTCGTCCTCCGTCTCCGTGGTGGT 1130988 Score = 122 bits (134), Expect = 1e-22 Identities = 170/237 (72%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || || || || || || || || | ||||| || | Sbjct 1130764 GTGGTATGCAAATCTTCGTCAAGACACTCACAGGCAAGACGATTACGTTGGAGGTAGAAT 1130705 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| | || |||||| ||||| ||||| || || ||||| | Sbjct 1130704 CATCGGACACCATCGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCGG 1130645 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || || || || ||| | || ||||| || || || | || | Sbjct 1130644 ACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACACTATCAGACT 1130585 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAA 172093 ||||| | || |||||| || || ||| | || || | ||||| || || |||| Sbjct 1130584 ACAACATCCAGAAGGAGAGCACACTGCACTTGGTGCTGCGTCTTCGTGGAGG-GCAA 1130529 >seq639 Length=794244 Score = 127 bits (140), Expect = 3e-24 Identities = 225/326 (69%), Gaps = 9/326 (3%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || ||||| |||| || | ||||| | || ||||| ||| Sbjct 61021 AAGATGAAGGAGACTGCTGAGGCTTTCTTGGGCAAGAACGTGAAGAACGCTGTTGTCACT 61080 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || |||||||||| || || || ||||| |||||||| || | | || | Sbjct 61081 GTCCCAGCTTACTTCAACGACCAGCAGCGTCAGGCCACAAAGGATGCCGGTCAGATCTCT 61140 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | | | | | ||||| || || || || ||||| |||| || ||||| Sbjct 61141 GGTCTTACCGTGCACCGTGTGATCAACGAGCCTACTGCTGCTGCGCTTGCCTACGGTCTT 61200 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || ||| || ||| ||| | ||| ||| ||||| ||||||||||| || Sbjct 61201 GAGAAGGAC---GAC-AAGGT-----TGTCGCTGTCTACGATCTTGGTGGTGGTACTTTC 61251 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||| |||| | ||| | || || | |||||||| |||||||| ||||| Sbjct 61252 GATATCTCCATCCTCGAGATCTCCAACGGCGTTTTCGAAGTCAAGGCTACCAACGGTGAC 61311 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| | ||||||||||||||||| Sbjct 61312 ACTCACTTGGGTGGTGAAGATTTCGA 61337 >seq671 Length=186828 Score = 116 bits (128), Expect = 5e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || ||||||||||| ||||| |||||||| || || || Sbjct 53806 CTTCGTCAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCGTCGGATACCAT 53865 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || |||| |||||| || || ||||| |||||||| || || ||||| || | Sbjct 53866 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTT 53925 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || ||||| || || | || ||||| || || || | || |||||| | || || Sbjct 53926 GATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAA 53985 Query 172050 GG 172051 || Sbjct 53986 GG 53987 >seq540 Length=65695 Score = 111 bits (122), Expect = 2e-19 Identities = 188/272 (69%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || |||||||||| || || || || || || |||||||| | | | || Sbjct 46950 ACTGTGCCAGCTTACTTCAACGACAACCAGCGTCAAGCCACCAAGGACGCCGGTTCCATC 47009 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || ||||| || || || || || || ||| Sbjct 47010 GCAGGACTCAACGTTCTCCGTATCATCAACGAGCCAACTGCTGCCGCTATCGCCTACGGT 47069 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | |||| ||| | || || || | |||| ||||||||||| ||| Sbjct 47070 CTCGGTGCTGGCAAGTCTGACAAGGAGCGCAACGTCCTCATCTACGATCTCGGTGGAGGT 47129 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || || ||||| || | || ||| | ||| || ||||| |||||| Sbjct 47130 ACCTTCGATGTGTCCCTCCTCAACATCCAGGGCGGTGTCTTCACTGTCAAGGCCACTGCT 47189 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || || | || ||| |||||||||| Sbjct 47190 GGTGACACCCACTTGGGAGGTCAAGATTTCGA 47221 >seq345 Length=1179958 Score = 111 bits (122), Expect = 2e-19 Identities = 243/362 (67%), Gaps = 13/362 (4%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || || |||||||| || ||| | | ||||||||||| || ||||| | | || Sbjct 784455 CCTGAGGAAATTTCCTCCATGATCCTCGGAAAGATGAAGGAAGTCGCTGAATCGTACTTG 784396 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | ||||| | | |||||||| ||||| || |||||||||| || | || || Sbjct 784395 GGCGAGACTGTTACCAACGCAGTTGTCACTGTGCCAGCTTACTTCAACGACGCTCAGCGT 784336 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 || || ||||| || | | || || ||||| ||| || | | |||| || Sbjct 784335 GCCGCAACCAAGGATGCGGGCACCATCGCTGGTCTCAACGTCCTCCGTGTGGTCAACGAG 784276 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGA---ACAAGGA-CG-AAGATAAAA 195866 || || || || || | || || ||||| ||||||| ||||||| || |||| | Sbjct 784275 CCCACTGCCGCCGCCCTCGCCTACGGTCTTGACAAGACCGACAAGGAGCGCCAGATCA-- 784218 Query 195867 ATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAG 195926 | ||| ||||| ||||| ||||| || ||||| || | | | | | || Sbjct 784217 ------TCGTCTACGATCTTGGTGGAGGTACTTTCGATGTTTCCATCTTGACTGTCGACC 784164 Query 195927 GTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCG 195986 || | |||||||| |||| |||||||||||||| ||||| || || || ||||||| Sbjct 784163 AGGGAGTGTTCGAAGTGCAGGCAACTGCTGGTGATACCCATCTGGGAGGCGAGGATTTCG 784104 Query 195987 AT 195988 || Sbjct 784103 AT 784102 Score = 95.1 bits (104), Expect = 2e-14 Identities = 176/258 (68%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || ||| || |||||| | ||||| || ||||| ||||||||| | || | | || Sbjct 784840 AGTTATCGGAATCGATCTTGGAACCACCTACTCTTGTGTTGGTAT----CATGAAGGGCG 784785 Query 195358 ----TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCT 195413 ||| |||||| || || || ||||||||||| | ||| || || | || || | Sbjct 784784 GCAATGTGGAGATTCTCGTCAACGATCAAGGAAACCGAATAACGCCGTCATGGGTGGCAT 784725 Query 195414 TTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTA 195473 | || | || ||||| || |||||||||||||| || ||| || |||||| Sbjct 784724 GGAACGACGACGAGCGTCTTGTCGGAGATGCCGCAAAGAACCAGTTCGCCTCGAACCCAC 784665 Query 195474 TCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCC 195533 | || ||||| || |||||||| ||||||||||||| ||| ||| | || | Sbjct 784664 ACCGAACCGTCTTCGATATCAAGCGTCTCATTGGTCGCAAGTACGAGGAGAAGGATGTAC 784605 Query 195534 AAGACGATATAAAGGACT 195551 | | ||||| ||| ||| Sbjct 784604 AGAAGGATATCAAGCACT 784587 >seq638 Length=503197 Score = 100 bits (110), Expect = 4e-16 Identities = 173/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 181869 CCAGTTCCAATACCCTCACTTCCATTGACCAAGATCATGGGTATAGTAGGCATATAGAAC 181928 |||||||||||||| ||| ||||||| | |||||| || | | | || | || || Sbjct 189038 CCAGTTCCAATACCATCAGCACCATTGATGAGGATCATTGGCACAATTGGGCTGTACAAT 188979 Query 181929 TCTGGTTCAATAGAGCGACCATCATCATCCAAATAATTAAGAATAGCATCATCCTTGGGA 181988 |||||||| |||| | | |||||||| || || | || || |||||||| || Sbjct 188978 TCTGGTTCGATAGTGTGGCCATCATCCTCGTTGTACCGCAAAAGCGCCTCATCCTTCTGA 188919 Query 181989 TCAAAAATTTTACGAGCCTCGGATGTCAGTCGTGTGAAGATATATCTCG-TCTGGCTAGC 182047 || |||| || || | || ||||| ||| | ||||| | | ||||| ||| Sbjct 188918 TCGAAAAGGCGGCGCGCGAAAGGTGACAGTCTCGTGTAAATATAACGAGCGCTGGC-AGC 188860 Query 182048 ATCCTTACCACCCAAAAGCCGTGTTCCAAATTGACCACATGGTTCGAGAAGATTGATATT 182107 ||| |||||||| || || | ||||| | ||||| ||| || |||||||| || || Sbjct 188859 ATCGCTACCACCCTGGAGACGGGAACCAAAGTTACCACTTGGCTCCAGAAGATTCATGTT 188800 Query 182108 GTTAGATCC 182116 ||| ||||| Sbjct 188799 GTTGGATCC 188791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657846405720400