Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq456 257 2e-63
seq455 152 7e-32
seq639 127 3e-24
seq671 116 5e-21
seq540 111 2e-19
seq345 111 2e-19
seq638 100 4e-16
>seq456
Length=274388
Score = 257 bits (284), Expect = 2e-63
Identities = 480/703 (68%), Gaps = 3/703 (0%)
Strand=Plus/Minus
Query 195285 ACATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTAT 195344
||| |||| | | ||| || ||||||||||| || || || ||||| || || ||| | |
Sbjct 84021 ACACAATGGCACCAGCCATCGGTATCGATTTGGGTACCACGTACTCGTGCGTGGGTATCT 83962
Query 195345 GGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGT 195404
| |||| ||| | || || ||| | || ||||| || ||||| ||||| || ||||
Sbjct 83961 TCAGAGATGACCGTATCGAAATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGT 83902
Query 195405 ACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA 195464
|| ||||| ||||| | || |||||| | || || |||| || || || || |
Sbjct 83901 TTGTCGCCTTCACAGACACCGAGCGTCTCATCGGTGACTCCGCGAAGAACCAAGTCGCCA 83842
Query 195465 TGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATA 195524
||||||| |||| || ||||| ||||| ||||| | || || |||||||| ||
Sbjct 83841 TGAACCCAGTCAACACAGTCTTCGACGCCAAGCGATTAATCGGACGCAAGTTCAACGACC 83782
Query 195525 AGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATA 195584
| || |||| ||| || ||| ||| | | | ||| | || | ||| | |
Sbjct 83781 CAGAGGTGCAAGCCGACATGAAGCACTTCCCCT-TCAAGGTCATC--GACAAGGCCGGCA 83725
Query 195585 AGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTT 195644
||||| | || | || || || | || || |||| ||| | || ||||| || |
Sbjct 83724 AGCCTGTCATCCAAGTCGAGTTCAAGGGCGAAGAGAAGACATTCTCCCCAGAAGAGATCT 83665
Query 195645 CGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGA 195704
| || ||||| | | |||||| ||||| || || || | | | ||| || || |
Sbjct 83664 CATCCATGGTCCTCACCAAGATGCGTGAGACCGCAGAGTCATACCTTGGTGGCACCGTCA 83605
Query 195705 AAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGG 195764
| | || ||||| ||||| || || ||||||| || || || |||| || || ||||
Sbjct 83604 ACAACGCTGTTGTCACTGTCCCAGCATACTTCAACGACTCGCAGAGACAAGCAACCAAGG 83545
Query 195765 ACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTG 195824
| |||| | ||||| || | ||| || | || ||||| || ||||| || ||||
Sbjct 83544 ATGCTGGTCTCATTGCTGGCTTGAACGTGCTCCGTATCATCAACGAGCCAACTGCCGCTG 83485
Query 195825 CAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATC 195884
| ||||| || ||||| |||||||| | || | || || || | ||||| ||
Sbjct 83484 CCATTGCCTACGGTCTCGACAAGAAGACCGAGGGCGAGCGCAACGTTCTCATCTTCGACT 83425
Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944
| ||||||||||| || |||||||| ||||||| || || | ||||| ||||| || |
Sbjct 83424 TGGGTGGTGGTACCTTCGATGTCTCTCTTCTCACAATCGAGGAGGGTATCTTCGAGGTCA 83365
Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| |||| || ||||| || || | |||||||| || |||||
Sbjct 83364 AGTCTACCGCCGGTGACACACACTTGGGTGGTGAGGACTTCGA 83322
>seq455
Length=1194790
Score = 152 bits (168), Expect = 7e-32
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || ||||||||||||||||| ||||| ||||| ||||| ||| |||| |
Sbjct 1131191 ACCGGCAAGACTATCACCCTCGAGGTGGAGTCTAGCGACACCATCGACAACGTCAAGTCG 1131132
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
|||||||| || ||||| |||||||| || || ||||| || || ||||| ||||| ||
Sbjct 1131131 AAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCATTTTCGCTGGCAAG 1131072
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|| || || || || |||||||| | ||||||||| | || |||||||| || || ||
Sbjct 1131071 CAACTCGAGGACGGCCGTACCCTGTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAT 1131012
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | || || ||||||
Sbjct 1131011 CTCGTCCTCCGTCTCCGTGGTGGT 1130988
Score = 122 bits (134), Expect = 1e-22
Identities = 170/237 (72%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || || || || || || || || || | ||||| || |
Sbjct 1130764 GTGGTATGCAAATCTTCGTCAAGACACTCACAGGCAAGACGATTACGTTGGAGGTAGAAT 1130705
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| ||||| ||| | || |||||| ||||| ||||| || || ||||| |
Sbjct 1130704 CATCGGACACCATCGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCGG 1130645
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || || || || || || ||| | || ||||| || || || | || |
Sbjct 1130644 ACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGCACACTATCAGACT 1130585
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAA 172093
||||| | || |||||| || || ||| | || || | ||||| || || ||||
Sbjct 1130584 ACAACATCCAGAAGGAGAGCACACTGCACTTGGTGCTGCGTCTTCGTGGAGG-GCAA 1130529
>seq639
Length=794244
Score = 127 bits (140), Expect = 3e-24
Identities = 225/326 (69%), Gaps = 9/326 (3%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||||||||| || ||||| |||| || | ||||| | || ||||| |||
Sbjct 61021 AAGATGAAGGAGACTGCTGAGGCTTTCTTGGGCAAGAACGTGAAGAACGCTGTTGTCACT 61080
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || |||||||||| || || || ||||| |||||||| || | | || |
Sbjct 61081 GTCCCAGCTTACTTCAACGACCAGCAGCGTCAGGCCACAAAGGATGCCGGTCAGATCTCT 61140
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| | | | | | ||||| || || || || ||||| |||| || |||||
Sbjct 61141 GGTCTTACCGTGCACCGTGTGATCAACGAGCCTACTGCTGCTGCGCTTGCCTACGGTCTT 61200
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901
|| ||| || ||| ||| | ||| ||| ||||| ||||||||||| ||
Sbjct 61201 GAGAAGGAC---GAC-AAGGT-----TGTCGCTGTCTACGATCTTGGTGGTGGTACTTTC 61251
Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961
||| |||| | ||| | || || | |||||||| |||||||| |||||
Sbjct 61252 GATATCTCCATCCTCGAGATCTCCAACGGCGTTTTCGAAGTCAAGGCTACCAACGGTGAC 61311
Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| | |||||||||||||||||
Sbjct 61312 ACTCACTTGGGTGGTGAAGATTTCGA 61337
>seq671
Length=186828
Score = 116 bits (128), Expect = 5e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929
||| || || ||||| || || || ||||||||||| ||||| |||||||| || || ||
Sbjct 53806 CTTCGTCAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCGTCGGATACCAT 53865
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| || |||| |||||| || || ||||| |||||||| || || ||||| || |
Sbjct 53866 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTT 53925
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
|| || ||||| || || | || ||||| || || || | || |||||| | || ||
Sbjct 53926 GATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAA 53985
Query 172050 GG 172051
||
Sbjct 53986 GG 53987
>seq540
Length=65695
Score = 111 bits (122), Expect = 2e-19
Identities = 188/272 (69%), Gaps = 3/272 (1%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
||||| || |||||||||| || || || || || || |||||||| | | | ||
Sbjct 46950 ACTGTGCCAGCTTACTTCAACGACAACCAGCGTCAAGCCACCAAGGACGCCGGTTCCATC 47009
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| ||| | || ||||| || ||||| || || || || || || |||
Sbjct 47010 GCAGGACTCAACGTTCTCCGTATCATCAACGAGCCAACTGCTGCCGCTATCGCCTACGGT 47069
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | |||| ||| | || || || | |||| ||||||||||| |||
Sbjct 47070 CTCGGTGCTGGCAAGTCTGACAAGGAGCGCAACGTCCTCATCTACGATCTCGGTGGAGGT 47129
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || ||||| || || ||||| || | || ||| | ||| || ||||| ||||||
Sbjct 47130 ACCTTCGATGTGTCCCTCCTCAACATCCAGGGCGGTGTCTTCACTGTCAAGGCCACTGCT 47189
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| || || | || ||| ||||||||||
Sbjct 47190 GGTGACACCCACTTGGGAGGTCAAGATTTCGA 47221
>seq345
Length=1179958
Score = 111 bits (122), Expect = 2e-19
Identities = 243/362 (67%), Gaps = 13/362 (4%)
Strand=Plus/Minus
Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691
|| || |||||||| || ||| | | ||||||||||| || ||||| | | ||
Sbjct 784455 CCTGAGGAAATTTCCTCCATGATCCTCGGAAAGATGAAGGAAGTCGCTGAATCGTACTTG 784396
Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751
|| | ||||| | | |||||||| ||||| || |||||||||| || | || ||
Sbjct 784395 GGCGAGACTGTTACCAACGCAGTTGTCACTGTGCCAGCTTACTTCAACGACGCTCAGCGT 784336
Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811
|| || ||||| || | | || || ||||| ||| || | | |||| ||
Sbjct 784335 GCCGCAACCAAGGATGCGGGCACCATCGCTGGTCTCAACGTCCTCCGTGTGGTCAACGAG 784276
Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGA---ACAAGGA-CG-AAGATAAAA 195866
|| || || || || | || || ||||| ||||||| ||||||| || |||| |
Sbjct 784275 CCCACTGCCGCCGCCCTCGCCTACGGTCTTGACAAGACCGACAAGGAGCGCCAGATCA-- 784218
Query 195867 ATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAG 195926
| ||| ||||| ||||| ||||| || ||||| || | | | | | ||
Sbjct 784217 ------TCGTCTACGATCTTGGTGGAGGTACTTTCGATGTTTCCATCTTGACTGTCGACC 784164
Query 195927 GTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCG 195986
|| | |||||||| |||| |||||||||||||| ||||| || || || |||||||
Sbjct 784163 AGGGAGTGTTCGAAGTGCAGGCAACTGCTGGTGATACCCATCTGGGAGGCGAGGATTTCG 784104
Query 195987 AT 195988
||
Sbjct 784103 AT 784102
Score = 95.1 bits (104), Expect = 2e-14
Identities = 176/258 (68%), Gaps = 8/258 (3%)
Strand=Plus/Minus
Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357
|| ||| || |||||| | ||||| || ||||| ||||||||| | || | | ||
Sbjct 784840 AGTTATCGGAATCGATCTTGGAACCACCTACTCTTGTGTTGGTAT----CATGAAGGGCG 784785
Query 195358 ----TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCT 195413
||| |||||| || || || ||||||||||| | ||| || || | || || |
Sbjct 784784 GCAATGTGGAGATTCTCGTCAACGATCAAGGAAACCGAATAACGCCGTCATGGGTGGCAT 784725
Query 195414 TTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTA 195473
| || | || ||||| || |||||||||||||| || ||| || ||||||
Sbjct 784724 GGAACGACGACGAGCGTCTTGTCGGAGATGCCGCAAAGAACCAGTTCGCCTCGAACCCAC 784665
Query 195474 TCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCC 195533
| || ||||| || |||||||| ||||||||||||| ||| ||| | || |
Sbjct 784664 ACCGAACCGTCTTCGATATCAAGCGTCTCATTGGTCGCAAGTACGAGGAGAAGGATGTAC 784605
Query 195534 AAGACGATATAAAGGACT 195551
| | ||||| ||| |||
Sbjct 784604 AGAAGGATATCAAGCACT 784587
>seq638
Length=503197
Score = 100 bits (110), Expect = 4e-16
Identities = 173/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 181869 CCAGTTCCAATACCCTCACTTCCATTGACCAAGATCATGGGTATAGTAGGCATATAGAAC 181928
|||||||||||||| ||| ||||||| | |||||| || | | | || | || ||
Sbjct 189038 CCAGTTCCAATACCATCAGCACCATTGATGAGGATCATTGGCACAATTGGGCTGTACAAT 188979
Query 181929 TCTGGTTCAATAGAGCGACCATCATCATCCAAATAATTAAGAATAGCATCATCCTTGGGA 181988
|||||||| |||| | | |||||||| || || | || || |||||||| ||
Sbjct 188978 TCTGGTTCGATAGTGTGGCCATCATCCTCGTTGTACCGCAAAAGCGCCTCATCCTTCTGA 188919
Query 181989 TCAAAAATTTTACGAGCCTCGGATGTCAGTCGTGTGAAGATATATCTCG-TCTGGCTAGC 182047
|| |||| || || | || ||||| ||| | ||||| | | ||||| |||
Sbjct 188918 TCGAAAAGGCGGCGCGCGAAAGGTGACAGTCTCGTGTAAATATAACGAGCGCTGGC-AGC 188860
Query 182048 ATCCTTACCACCCAAAAGCCGTGTTCCAAATTGACCACATGGTTCGAGAAGATTGATATT 182107
||| |||||||| || || | ||||| | ||||| ||| || |||||||| || ||
Sbjct 188859 ATCGCTACCACCCTGGAGACGGGAACCAAAGTTACCACTTGGCTCCAGAAGATTCATGTT 188800
Query 182108 GTTAGATCC 182116
||| |||||
Sbjct 188799 GTTGGATCC 188791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657846405720400
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