Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq679 114 4e-20 seq638 87.8 5e-12 >seq679 Length=230803 Score = 114 bits (126), Expect = 4e-20 Identities = 117/150 (78%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||||||||||||||| ||||| ||||||||||||||||| | || Sbjct 199555 TGAGCAATGGTCATACGACTGGGAATAGCGTGGGGGTTGATGATGATGTCGGGCGTGAGA 199496 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || |||| ||||| |||| | || ||| || | || || || ||||| || Sbjct 199495 CCGTCCGCGCTGAACGGCATGTCCTCCT-GTCGGTAAGTGATACCGATTGTACCCTTCTG 199437 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||| ||| ||||||||||| || Sbjct 199436 TCCGTGACGGGAAGCAAACTTATCACCGAT 199407 Score = 105 bits (116), Expect = 2e-17 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || |||||||| | | || | ||||||| | |||| || || ||||| || || Sbjct 199987 ATCAGACCACAGATCTCGCAAATGTGGACGCGGAAAGCGTCTGAGACGTCAAGAAGACGC 199928 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || |||||||| | |||||||||||| |||||||| || |||||| Sbjct 199927 TCCTTCAAGAATGCCGAAGCACCGTGGGCAATCATACAATCGCGCTCCATCTCTCCGAAA 199868 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 ||||| |||||||| ||||| | ||| || | ||||| || |||||| Sbjct 199867 CGAAGTCCACCATCTCGAGCACGACCTTCCACGGGCTGGCGTGTGAGA 199820 >seq638 Length=503197 Score = 87.8 bits (96), Expect = 5e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| || || |||| | ||| | | |||||||||||| || || ||| || || Sbjct 463520 ATCATGATCTCCTCCAGAGCCTTCACGAGACGACGCTGAATGTATCCGGTTTCAGCGGTC 463579 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| ||||| || ||||| ||||||||||||| || |||||||| | ||| | Sbjct 463580 TTGACAGCAGTATCGATCAGACCCTCACGACCACCCATTGCGTGGAAGAAGAACTCCTGA 463639 Query 302683 GGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACC 302720 ||| || || | || | ||| |||| ||||| || Sbjct 463640 GGTGTGAGACCGCGAAGGTAAGAGTTCTCGACGAATCC 463677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471780921845465