Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq110 152 4e-32 >seq110 Length=228562 Score = 152 bits (168), Expect = 4e-32 Identities = 231/329 (70%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | || ||| |||| || |||||| |||||| || ||||| | Sbjct 213800 GTCTCTGGGTTCTTGCACTCCTTGCACAGGACGAACTTGTTGATGAAGCCGTCAAGGTAG 213741 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| ||||| | | ||||| | ||||||| ||| | || || | |||| ||| Sbjct 213740 TCCTGCAACTTGCCTGCCTCGTGAGCACCGTTGATGATCCAGCGGTCATCTTTGGGGTCG 213681 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || |||||||||||| | ||||||||||| | ||| | | || ||| Sbjct 213680 ATGTTGGTCTGGGCGCCCAGCTCGAATCCGAAGTACTTGATGACATAATTTGGTGGGCGT 213621 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | || | ||| | | | | |||||||||||| |||||||||||||| ||||| Sbjct 213620 GCGAGTTGGTGGGCCACCTGGCTTAGGTTGACGATGACGGTCTTGATGCCGTTACCCTTA 213561 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 || || ||||||| ||||||| ||| |||||||||||||| | || || |||| | Sbjct 213560 CCCTCTACCTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAAGGGATCGGCGACATCG 213501 Query 34621 CGGTTAACGTTCACAGTCCCCATCGTGGC 34649 || || ||| ||||| |||| || || Sbjct 213500 CGACGAATGTTGACAGTAGCCATGGTTGC 213472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412831813718885