Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq530 96.9 3e-15 seq455 84.2 2e-11 >seq530 Length=291 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 29556 TTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC 29615 ||| ||||| | | |||||||||||| || || ||| || || || ||||| || || Sbjct 35 TTGCCCTCCACGAAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTC 94 Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675 | | |||||| ||| || | || ||||| || | |||| | ||||| ||||| Sbjct 95 TGATAGTGTGCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGG 154 Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 || || ||||| |||||||| | || |||||| | || | |||||| || Sbjct 155 TGGGATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTC 214 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || ||||| || | ||| || || || |||||||| Sbjct 215 GACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 265 >seq455 Length=1194790 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 29556 TTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC 29615 ||| ||||| | | |||||||||||| || || ||| || || || ||||| || || Sbjct 1130529 TTGCCCTCCACGAAGACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTC 1130588 Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675 | | |||||| ||| || | || ||||| || | |||| | ||||| ||||| Sbjct 1130589 TGATAGTGTGCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGG 1130648 Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 || |||||||| |||||||| | || || || | || | ||||| || ||| Sbjct 1130649 TGGGATACCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATGGTGTCCGATGATTC 1130708 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || | || || || ||||| || | || || || || || ||||| Sbjct 1130709 TACCTCCAACGTAATCGTCTTGCCTGTGAGTGTCTTGACGAAGATTTGCAT 1130759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385210068499245