Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq680 89.7 5e-13
seq455 82.4 7e-11
>seq680
Length=821847
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561
|| ||||| | ||| || |||| || || || || ||| | || || || | |||
Sbjct 340924 GAGGCCGTTGCCATTGAGCAAGAATTCTTGACCGATGCTCTGCCTTGCGCGCTGCTCGGC 340983
Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50621
|||||||| | | |||||| |||||||||||||||| || ||| || || || |
Sbjct 340984 ATGAACGCTAAGCTCATGTGCCAGTACATTGAGTTTGTCGCTGACCGACTGCTGCTCGCT 341043
Query 50622 CTGGGACAACCGAAA-TACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATC 50680
|| || ||||| ||| | ||| || || |||||||| || ||| | ||||| ||
Sbjct 341044 CTTGG-CAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTC 341102
Query 50681 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726
| | ||||| || ||||| ||||| | ||||| ||||| |||
Sbjct 341103 TCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGACTAC 341148
>seq455
Length=1194790
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| ||||||| ||| | || || || | || ||||| ||||| |||||||| ||
Sbjct 1130761 CCACCTCGTAGACGAAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAG 1130820
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| |||||||||||| || || || |||||| || ||||| || || ||
Sbjct 1130821 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGG 1130880
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
||||| || ||||| || || || | | || | ||||| | | || ||
Sbjct 1130881 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTCGACC 1130940
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|||| ||| | ||||||||||| | || || ||||| || ||||||
Sbjct 1130941 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 1130988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488532122274000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |