Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq411 226 3e-54
seq680 163 3e-35
seq455 132 5e-26
seq530 116 4e-21
seq653 86.0 6e-12
>seq411
Length=240905
Score = 226 bits (250), Expect = 3e-54
Identities = 1112/1734 (64%), Gaps = 47/1734 (3%)
Strand=Plus/Minus
Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCTC 148120
|| || ||||| || || ||||| |||||||||| || | || || | || || ||
Sbjct 125410 TGATCGATGAAGGCACCGCGGTCCGCGGCCATTTGAACAATGTTGCGCTGACTG-ATTTC 125352
Query 148121 CCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCG--ATGCGCTGCACC 148178
|||| | |||||||||| | ||||| | || |||||| ||| ||||| |||||
Sbjct 125351 CCAGACAGTCTTGTACAACGCCTTGAGGTCGTCCGGAATGT--TCGGAATGCGTTGCACG 125294
Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238
|| |||| || || | || | || ||| | || | | | | ||||
Sbjct 125293 GAACCGCCGTCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAATCCACGGTCGACG 125234
Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298
|| || | | || | | || || || || || || ||||| ||||| || || |||
Sbjct 125233 AGATCCTTCAGCAACCATGGGTTGACGACTTGGAATTCTCCGGCAAGCACACGACG-AGA 125175
Query 148299 -TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357
|| | |||||| || | || || || |||||||| ||||| ||||||| || |
Sbjct 125174 GTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGATGTGGA 125115
Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417
|| || ||||| || ||||| || |||||||| | |||| | | || |||
Sbjct 125114 GGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGCGGACACCGTGCTGAGCGATCTTGGC 125055
Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477
||| || || ||||||||||||| || ||||| ||| |||||| |||||||| ||
Sbjct 125054 CTTGAGCGCGTCCCAGTCCCAGAGGTCTGAAGGTGTGACGCCCCACATCTCGTACTGAAG 124995
Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537
||| | | ||| ||||||||||| ||| || || || || ||
Sbjct 124994 TTCGCCCTTTGAAACCGGGGAGCCCTCGTACGTCTCGTATGGACCAAGCTTGCTAGCAAG 124935
Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAG 148597
||||| || |||||| ||| ||| || |||||| || || ||| || |
Sbjct 124934 GTCGCACGATGCGGTGAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGGACGTTCAGGTG 124875
Query 148598 CGCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC-C 148655
||| || | || | ||||| || || || || || || ||||| || |
Sbjct 124874 ACGGGCCT-CTGGAGACTCAAAAGGCATGCGTAGAGCCAGGAAAGCATCAGCAAGACCGC 124816
Query 148656 TGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GG 148714
|| || || | || || || | ||| |||||| ||| ||| | | ||
Sbjct 124815 TG-ACACCGAGACCGATTGGTCTGTGGCGCATGTTGCTCTTCTTCGC-CTCAGGCACTGG 124758
Query 148715 ATAGTGGTTGCGGTCGATGATCTTGT-CAAGAT--TGCGCACCACCACCTTTGTA-ATTC 148770
||||||||| ||||||||||||| |||| | || || || ||| | | |
Sbjct 124757 GTAGTGGTTGACTTCGATGATCTTGTTCAAGTTCTTGGTGACGAC-----TTGCACAACC 124703
Query 148771 T-GCGCAGCAATTCAAAATCGTA---CTTGTCATCTACGATGCA--TCGGTT--CACGGC 148822
| | | ||| ||||| ||| | || || || | ||| | | |||| || ||
Sbjct 124702 TCGTGGAGCTTCTCAAAGTCGAAACGCTCGTTCTCAA-GATCGACGTAGGTTGGCAGAGC 124644
Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882
| ||| || || ||||||||||| ||| || || ||| ||||||| | |||||| |
Sbjct 124643 AAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATCTCAGT 124584
Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942
||||| ||| | |||||| || | |||||| || |||||||||| |||| ||
Sbjct 124583 GCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGC 124524
Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATG 149002
|||||||| |||||| | ||||| ||||| || ||| | ||||| || | | ||
Sbjct 124523 ATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGAT-AGC--ATA 124467
Query 149003 CAGGTCC---TGCGCGCGCACTTGCTGCTCGT-AGCGACCCTCCTGCTCGTATAAAGTAT 149058
| | || || ||||| || || | ||| ||||| || |||||| || |
Sbjct 124466 CCAGACCTTTTGAGCGCGGACAGTCT-CACGTCCACGACCTTCTCTCTCGTAGCGGGTGT 124408
Query 149059 ACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACA 149118
||||| ||||||| | || ||||| ||| ||||||| ||||||| | |||||||
Sbjct 124407 ACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACA 124348
Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178
|||| | ||| | ||| || | || |||||||| |||||||| || | ||| || |
Sbjct 124347 TGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAG 124288
Query 149179 CGTACATGAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237
|| | | || || || | | ||| || || || ||| ||| |||| |
Sbjct 124287 CGAAGAACAGATCACGTG-CACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATG 124229
Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC--- 149294
| | || | || |||||||| ||||| | ||| | |||| |||||| |||
Sbjct 124228 AAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTG 124169
Query 149295 TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354
||||| || |||||||| | ||| | |||| || | || || | ||| || |
Sbjct 124168 TTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGA 124109
Query 149355 CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACG 149414
||| ||| |||||||| || |||| || || || | ||||| |
Sbjct 124108 CCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTTGTGGCAG 124049
Query 149415 TTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTA 149473
|| | ||| || || || | | ||| ||||| |||| |||| | || || |||
Sbjct 124048 TTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTC-AGTGTGTCGTA 123990
Query 149474 GATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAA 149533
||| ||||| |||||||| ||||||| | || ||||| || || || | |
Sbjct 123989 GATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATT 123930
Query 149534 ACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCAT 149593
|||| || || ||||| || || |||||||| || ||||| | |||
Sbjct 123929 CGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTA 123870
Query 149594 CTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCAT 149653
| ||| | ||| | || || || || ||||| ||||| || | || || |||||
Sbjct 123869 GTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCCACACGCAT 123810
Query 149654 CAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTC 149713
| ||| ||||| |||| ||| || |||||| |||| ||||||||| | |||
Sbjct 123809 GATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGCGTTC 123750
Query 149714 TAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767
|| |||||| | |||||||| | ||||| || || | | | | | |||||||
Sbjct 123749 CAGCGTCTTGAAACCAAAGTATTGGTAGTTGAAATCTCTGTCATAGACAATGGC 123696
>seq680
Length=821847
Score = 163 bits (180), Expect = 3e-35
Identities = 539/819 (66%), Gaps = 33/819 (4%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||||| || || ||||| || ||||| || ||||| | | || ||||| |
Sbjct 341151 CTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTC 341092
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTA-TTTCGGCTGGCCCAACTGTACG-AGC 120468
||| || ||||| |||||| | ||||| || | ||| || || |||| | | |||
Sbjct 341091 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTG--CCAAGAGCGAGCAGC 341034
Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528
|||||||| || |||||||||||||||| ||||||| || ||||||||||| |||| |
Sbjct 341033 AGTCGGTCAGCGACAAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGC 340974
Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588
|| |||| || || || || || | ||||||| | || |||||| || |||
Sbjct 340973 GCGCAAGGCAGAGCATCGGTCAAGAATTCTTGCTCAATGGCAACGGCCTCCACGATGATG 340914
Query 120589 GCGAGC---ATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCAC 120645
|| | | | | |||| ||||| | || | | | | | ||||||
Sbjct 340913 CTTTGCACGACCGACTTGGCGGG---CTTGTTCTTGAGGTGAG---AGAACAGCAGGCAA 340860
Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705
|| ||||| ||||||| ||||||||| || || || ||||||||| || || |||||
Sbjct 340859 GCGAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCA 340800
Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765
| ||||| || | |||| | |||| |||| || || ||| || ||||| |
Sbjct 340799 GCCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGAGCCGGAGAAGAAGATA 340740
Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC---G 120822
||||| || |||||||||| || ||| || || || | ||| | |||| |
Sbjct 340739 CCCTCGACAGCAGCAAAGGCGATCAATCGCATAGCGAAAGTAG-AGTCCT--TGTCCGAG 340683
Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTT- 120881
||||| || ||||| || |||||| |||| | || || || |||| |||||
Sbjct 340682 ATCCATCGCAGTGCCCAGTCAGCCTTTCTGCGGATACAAGGGATGTTGTCGATGGCGTTG 340623
Query 120882 CAGCAGCATG-TCGC-GCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTAC 120939
|| | ||| |||| ||| | ||| | | | || | |||||| || |||
Sbjct 340622 AAGAGGTATGTTCGCTGCTTGGGCTC--GCTGATGTATGTG-TCGATGAGGAGGGAGTAT 340566
Query 120940 ATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGC 120999
| || | ||| | | ||| |||| | || | ||| ||| | | |||||| |
Sbjct 340565 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGT 340506
Query 121000 TCGGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGC 121058
||||| | ||||| || ||||| ||||| || || || | ||||| ||
Sbjct 340505 ATTTGCACCTCGGCGCTGAAT-CGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGC 340447
Query 121059 GGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGA---GCTTGTG 121115
||||||||| || || ||||| ||| ||| ||||||||||| ||| ||||||
Sbjct 340446 GGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGCTTGTT 340387
Query 121116 CGCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTC 121154
| | |||| ||||||||||| || | ||| ||
Sbjct 340386 C---CAGTCGTGGAGATCCTTGGACAGATCAATCTCTTC 340351
>seq455
Length=1194790
Score = 132 bits (146), Expect = 5e-26
Identities = 141/184 (77%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||||||||| ||||| || ||||||||| || || ||| |||||||||
Sbjct 1131012 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGT--ACGGCCGTCCTCGAGT 1131069
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| ||| ||||||| ||||||||||| ||||| ||||| |||||||| |||
Sbjct 1131070 TGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATC 1131129
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | || | |||||| | | |||||| |||| ||||| || ||||||
Sbjct 1131130 TTCGACTTGACGTTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTGCCG 1131189
Query 133635 GTCA 133638
||||
Sbjct 1131190 GTCA 1131193
Score = 105 bits (116), Expect = 6e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| ||||| |||||||| ||| | || | ||||||||||| || |||||||| |||||
Sbjct 1130832 GTCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGGATGCCCTCCTT 1130891
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | || | |||||| | | ||| || || | ||||
Sbjct 1130892 GTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTCGACCTCAAGAGTGAT 1130951
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||| |||||||| || || || ||||| ||||||||
Sbjct 1130952 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1130987
>seq530
Length=291
Score = 116 bits (128), Expect = 4e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| ||||| || ||||| || | ||| ||| | ||||| | |||||||||||||
Sbjct 74 CTCCTTCTGGATGTTGTAGTCTGATAGTGTGCGACCA-TCCTCCAACTGCTTGCCCGCGA 132
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
| || || ||||||||||| || |||||||| |||||||| |||||| ||||| |
Sbjct 133 AGATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTGGACTTGACAT 192
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
|| | |||||| | | ||| || || | |||| ||| |||||||| || || || |
Sbjct 193 TGTCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGA 252
Query 133648 CGAAAATCTGCAT 133660
|||| ||||||||
Sbjct 253 CGAAGATCTGCAT 265
>seq653
Length=579839
Score = 86.0 bits (94), Expect = 6e-12
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||| ||||| || ||||| |||| | ||| | | | ||||||||
Sbjct 344603 AAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCA-TCCTCGAG 344661
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567
||||||||| ||| | || | ||||||||||| || ||||| || ||||||||
Sbjct 344662 CTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTC 344715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483409046831800
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