Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq455 111 1e-19 seq530 102 5e-17 >seq455 Length=1194790 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | |||||| || ||||| || ||||| |||||||| || || Sbjct 1130760 ACCACCTCGTAGACGAAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCCGA 1130819 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | ||| || ||||| || ||||| |||||||| || | || Sbjct 1130820 GAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 1130879 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | ||| ||| | |||||||| || || | Sbjct 1130880 GATGCCCTCCTTGTCTTGGATCTTGGACTTGA-CATTGTCGATAGTGTCGCTCGACTCGA 1130938 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | || || || |||||||||||| Sbjct 1130939 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 1130988 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || ||| ||| || || |||||||||||||| Sbjct 1130988 ACCACCACGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 1131047 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| || | ||| || || || ||||| | ||||||||| || | || Sbjct 1131048 CAGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGAGG 1131107 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| ||| | | || | ||| | ||||||||| || |||| Sbjct 1131108 AATGCCCTCCTTGTCCTGAATCTTC-GACTTGACGTTGTCGATGGTGTCGCTAGACTCCA 1131166 Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725 | || | ||||| || || || || Sbjct 1131167 CCTCGAGGGTGATAGTCTTGCCGGT 1131191 >seq530 Length=291 Score = 102 bits (112), Expect = 5e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || |||||||| || || |||||||| || || |||||||| | Sbjct 50 ACGCAGCACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCTGATAGTGTGCGACC 109 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || ||||| || || || || || |||| |||||||| || | || | || || || Sbjct 110 ATCCTCCAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTT 169 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || || | ||| ||| | |||||||| || || || |||| |||| Sbjct 170 GTCTTGGATCTTGGACTTGA-CATTGTCGATAGTGTCGCTCGACTCGACCTCAAGAGTGA 228 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || | || || || |||||||||||| Sbjct 229 TGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328696208174400