Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq680 187 4e-41
seq444 102 1e-15
>seq680
Length=821847
Score = 187 bits (206), Expect = 4e-41
Identities = 359/516 (70%), Gaps = 30/516 (6%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| | |||||| || ||||||||||| || || ||||| ||||| ||| | || |
Sbjct 340305 GATATGGAACATGTAC-AAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATC 340363
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| || | | |||||||||||| |||
Sbjct 340364 TGTCCAAGGATCTCCACG----ACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTC 340419
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| || || || |||||| ||| ||||| || |||||||||||
Sbjct 340420 ATCTCACACGTCCTTGCATTCTT-CGCCGCATCCGACGGCATTGTCAACGAGAACCTGGT 340478
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| || || | ||||| ||| | || |||||||| | || ||||| ||||||||
Sbjct 340479 CGAGCGATTCAGCGCCGAGGTGCAAATACCGGAGGCACGATGCTTCTACGGCTTCCAGAT 340538
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || || ||||| ||||| |||||||| ||| ||| ||
Sbjct 340539 CATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGA 340598
Query 1456068 CCCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAA 1456124
|| | || || || | ||||||| ||||||||||| | || | | | |
Sbjct 340599 GCC---CAAGCAGCGAACATACCTCTTCAACGCCATCGACAACATCCCTTGTATCCGCAG 340655
Query 1456125 AAAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAG 1456181
|||||| |||||||| || |||||| ||||||| ||| || || || |
Sbjct 340656 AAAGGCTGACTGGGCACTGCGATGGATCTCGGACAAGGA----CTCTAC-TTTCGCTATG 340710
Query 1456182 CGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCAT 1456239
|| | ||| |||||| || |||||||| ||||| ||||| ||| ||| ||| ||||
Sbjct 340711 CGATTGATCGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTC-GCGTCCAT 340769
Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||| ||| | |||||||| || |||||| | || ||
Sbjct 340770 CTTCTGGTTGAAGAAGCGTGGTCTCATGGCTGGCCT 340805
Score = 134 bits (148), Expect = 2e-25
Identities = 231/327 (71%), Gaps = 10/327 (3%)
Strand=Plus/Plus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGA---CCG 1456508
||||| |||||| || || ||||| | | | ||| |||||||| | | | |
Sbjct 340844 TGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCTCAAGAACAAGCCCGCCAAGTCGG 340903
Query 1456509 ACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGT 1456568
||||| ||||| ||||||| |||||||| | || ||| |||| || | | |||
Sbjct 340904 TCGTGCA-AAGCA--TCATCGTGGAGGCCGTTGCCATTGAGCAAGAATTCTTGACCGATG 340960
Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628
| ||||| ||||| ||||||||||||| | |||||||||||||||||||| | ||
Sbjct 340961 CTCTGCCTTGCGCGCTGCTCGGCATGAACGCTA-AGCTCATGTGCCAGTACATTG-AGTT 341018
Query 1456629 TGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACC 1456688
|||||| ||||| ||||| || || ||| | | ||| |||| | ||||||
Sbjct 341019 TGTCGCTGACCGACTGCTGCTCGCTCTTGGCAAC-CAAAAGTTCTACAACGCCACCAACC 341077
Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748
| ||| | |||||| ||||| |||| |||||||||||||| |||||| || |
Sbjct 341078 CCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 341137
Query 1456749 -TGGCGAGTACGCCAAGGCCGGCGTCA 1456774
|||||| ||| |||||||| ||||
Sbjct 341138 TTGGCGACTACCAGAAGGCCGGTGTCA 341164
>seq444
Length=771681
Score = 102 bits (112), Expect = 1e-15
Identities = 157/223 (70%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 724920 GTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATC 724979
|| ||||||||||| ||||| || | | ||| |||||| |||||||||||
Sbjct 140682 GTCCTCAAGCAGGTCCACCCAGACACTGGT-----ATC-TCCAACCGTGCCATGTCGATC 140629
Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039
| ||||| || || |||||||| |||| ||| ||| || |||||| || ||
Sbjct 140628 CTCAACTCCTTCGTGAACGACATCTTCGAGCGCGTCGCAACTGAGGCCTCCAAGCTCGCT 140569
Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099
|| ||||||| |||||| | ||||| |||||||| ||||||| || |||
Sbjct 140568 GCCTACAACAAGAAGTCAACGATCTCATCACGCGAAATCCAGACTTCCGTGCGACTCATC 140509
Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| | || || ||||||| ||||||||| || ||||||||||
Sbjct 140508 CTCCCTGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 140466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177623601175090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |