Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq411 150 2e-31 >seq411 Length=240905 Score = 150 bits (166), Expect = 2e-31 Identities = 575/888 (65%), Gaps = 20/888 (2%) Strand=Plus/Minus Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408 ||||| || || || || | ||| || ||||| ||| || |||||||| || || Sbjct 124567 TTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATG 124508 Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468 || || |||||| ||| |||| | ||| | |||| | ||| |||| | | Sbjct 124507 AAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCATACCA---GACCTTTTGAGCG 124451 Query 69469 ATTACGGTCTT--GTA-ACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATT 69523 || |||| || ||| ||||||| | | || | || || ||| ||||| | Sbjct 124450 CGGACAGTCTCACGTCCACGACCTTCTCTCT--CGTAGCGGGTGTACAGCTCCTCGAACT 124393 Query 69524 CATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583 | || || | |||||| | | ||||| || ||||| || ||||| | || ||| | Sbjct 124392 CGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACATGAGTGTCCATTCTG 124333 Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTC 69643 | | | | || || ||||| || ||||| || ||||||||||| | || ||||| | Sbjct 124332 CGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAGCGAAGAACAGATCAC 124273 Query 69644 TGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703 | | ||| || ||||| || || || || | || || | ||| | Sbjct 124272 GTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATGAAGGAGATGACATCTG 124213 Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763 |||||||| ||||| || || || | | || || || || || || || || || | Sbjct 124212 CGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTGTTGCCACCTTGGTCGA 124153 Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823 || | |||||||||||| ||||| | || |||||| || | |||||| ||| | || | Sbjct 124152 CATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGACCATTGGATGTGCCGT 124093 Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCT 69882 |||| || | ||| || ||| | || || || || | || | || || || || Sbjct 124092 TTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTT-GTGGCAGTTCAGGCCAATACCA 124034 Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942 || || | || ||||| | || ||| |||| |||||| || |||||||| ||||| Sbjct 124033 CCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCGTAGATACCCTCAATGCTG 123974 Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002 ||||| |||||| | | || || || || || || || || || | Sbjct 123973 TCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATTCGGCGTACCAGCGCTG 123914 Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTT-TTCAGAAAGCAGATTGTATGTTTCAAT 70061 || | |||||| || ||||| ||||| |||| ||| | | || ||||| || ||||| Sbjct 123913 AACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTAG-TTGTAGGTCTCAAT 123855 Query 70062 AGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120 || | || ||||| | | | || ||||| | || |||||||| | ||| ||||| | Sbjct 123854 GGCGGCCTCGATATCGTCGCCG-TGGATTCCAACAGCCACACGCATGATCATGTGCTGTG 123796 Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180 ||| || | ||| || || | || |||||| |||||| || || || | Sbjct 123795 GTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGCGTTCCAGCGTCTTGAAAC 123736 Query 70181 CAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 |||| || | ||| ||||| ||||| || || | ||| |||| || Sbjct 123735 CAAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAATGGCAGAGTT 123690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686892099529800