Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq411 150 2e-31
>seq411
Length=240905
Score = 150 bits (166), Expect = 2e-31
Identities = 575/888 (65%), Gaps = 20/888 (2%)
Strand=Plus/Minus
Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408
||||| || || || || | ||| || ||||| ||| || |||||||| || ||
Sbjct 124567 TTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATG 124508
Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468
|| || |||||| ||| |||| | ||| | |||| | ||| |||| | |
Sbjct 124507 AAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCATACCA---GACCTTTTGAGCG 124451
Query 69469 ATTACGGTCTT--GTA-ACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATT 69523
|| |||| || ||| ||||||| | | || | || || ||| ||||| |
Sbjct 124450 CGGACAGTCTCACGTCCACGACCTTCTCTCT--CGTAGCGGGTGTACAGCTCCTCGAACT 124393
Query 69524 CATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583
| || || | |||||| | | ||||| || ||||| || ||||| | || ||| |
Sbjct 124392 CGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACATGAGTGTCCATTCTG 124333
Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTC 69643
| | | | || || ||||| || ||||| || ||||||||||| | || ||||| |
Sbjct 124332 CGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAGCGAAGAACAGATCAC 124273
Query 69644 TGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703
| | ||| || ||||| || || || || | || || | ||| |
Sbjct 124272 GTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATGAAGGAGATGACATCTG 124213
Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763
|||||||| ||||| || || || | | || || || || || || || || || |
Sbjct 124212 CGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTGTTGCCACCTTGGTCGA 124153
Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823
|| | |||||||||||| ||||| | || |||||| || | |||||| ||| | || |
Sbjct 124152 CATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGACCATTGGATGTGCCGT 124093
Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCT 69882
|||| || | ||| || ||| | || || || || | || | || || || ||
Sbjct 124092 TTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTT-GTGGCAGTTCAGGCCAATACCA 124034
Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942
|| || | || ||||| | || ||| |||| |||||| || |||||||| |||||
Sbjct 124033 CCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCGTAGATACCCTCAATGCTG 123974
Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002
||||| |||||| | | || || || || || || || || || |
Sbjct 123973 TCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATTCGGCGTACCAGCGCTG 123914
Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTT-TTCAGAAAGCAGATTGTATGTTTCAAT 70061
|| | |||||| || ||||| ||||| |||| ||| | | || ||||| || |||||
Sbjct 123913 AACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTAG-TTGTAGGTCTCAAT 123855
Query 70062 AGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120
|| | || ||||| | | | || ||||| | || |||||||| | ||| ||||| |
Sbjct 123854 GGCGGCCTCGATATCGTCGCCG-TGGATTCCAACAGCCACACGCATGATCATGTGCTGTG 123796
Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180
||| || | ||| || || | || |||||| |||||| || || || |
Sbjct 123795 GTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGCGTTCCAGCGTCTTGAAAC 123736
Query 70181 CAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226
|||| || | ||| ||||| ||||| || || | ||| |||| ||
Sbjct 123735 CAAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAATGGCAGAGTT 123690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686892099529800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |