Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq411 167 3e-36
seq680 100 4e-16
seq638 86.0 8e-12
>seq411
Length=240905
Score = 167 bits (184), Expect = 3e-36
Identities = 893/1403 (64%), Gaps = 49/1403 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||||||| | |||||||| || ||||| || || |||| ||| || | |||||
Sbjct 125174 GTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGATGTGGA 125115
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
||| || ||||||||||| | || ||| ||| || | ||| | || ||| |
Sbjct 125114 GGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGCGGACACCGTGCTGAGCGATCTTGGC 125055
Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATGTCAAACTGA 110884
|||||| | |||||||| || | || ||| | || ||||||| || |||||
Sbjct 125054 CTTGAGCGCGTCCCAGTCCCAGAGGT-CTGAAGGTGTGACGC-CCCACATCTCGTACTGA 124997
Query 110885 AGCAC-CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG--GCTTCA 110941
|| | ||||| | | |||| || ||||| | || || || | ||| | ||| |
Sbjct 124996 AGTTCGCCCTTTGAAACCGGG-GAGCCCTCGTACGTCTCGTATGGACCAAGCTTGCT--A 124940
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | || || || || | ||||| || ||||| || ||||| | | |||
Sbjct 124939 GCAAGGTCGCACGATGCGGTGAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGGACGTTC 124880
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCG 111056
| | ||| || || ||||| ||||||| | || ||| |||| |
Sbjct 124879 AGGTGACGGGCCTCTGGAGACTCAAAAGGCATGCGTAGAGCCAGGAAAG-----CATCAG 124825
Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116
| ||||| ||||| | ||| || |||||||| ||||| || ||| ||| ||
Sbjct 124824 CAAGACCGCTGACACCGAGACCGATTGGTCTGTGGCGCATGTTGCTCTTCTTCGC---CT 124768
Query 111117 CA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTG 111173
|| || || || || || |||| ||| | || ||||| || | |
Sbjct 124767 CAGGCACTGGGTAGTGGTTGACTTCGATGATCTTGTTCAAGTTCTTGGTGACGACTTGCA 124708
Query 111174 TGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT-CTCTTCATTGACATACTTTGGA 111232
| || || || || ||| | || ||| || || ||| || ||| || ||||
Sbjct 124707 CAACCTCGTGGAGCTTCTCAAAGTCGAAAC-GCTCGTTCTCAAGATCGACGTAGGTTGGC 124649
Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292
|| || | ||||| | ||||| || || ||| || | |||||||| | ||
Sbjct 124648 AGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATC 124589
Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352
|| || || |||||||||||||| ||||| || | ||||| ||||| ||||| ||||
Sbjct 124588 TCAGTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 124529
Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412
|||||||||||||||||| | || || ||||| ||||| | || | |||||
Sbjct 124528 GCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCA 124469
Query 111413 TTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTG 111472
| ||| || | || | ||| | | | || || || |||||| |||
Sbjct 124468 TACCAGACCTTTTGAGCGCGGACAGTCTCACGTCCACGACCTTCTCTCTCGTAGCGGGTG 124409
Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532
|| || | || ||||| ||||| | | || | |||||| || || | || ||
Sbjct 124408 TACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCAC 124349
Query 111533 AAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590
| || | ||||| | | || | || || ||||||||||| || ||||| ||||| |
Sbjct 124348 ATGAGTGTCCATT--CTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAA 124291
Query 111591 GGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
| | | || ||||| | | ||| | | || || | || ||||| || | ||
Sbjct 124290 GAGCGAAGAACAGATCACGTGCACGCA-CTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCC 124232
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGA 111709
| ||| |||| ||| |||||||||||||| || |||| |||| | || ||
Sbjct 124231 ATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCC---AGGA 124175
Query 111710 CGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763
||| ||| |||| | |||||||| || ||| || | ||||| | ||| ||
Sbjct 124174 CGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGG 124115
Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823
|| | ||||| ||| || ||||| || ||| ||| | | || | | |
Sbjct 124114 ATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTTG 124055
Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAG 111881
||| || || |||||||| ||||| ||| ||||| | ||||| | | | | || |
Sbjct 124054 TGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCA-AGT-CTTCAGTG 123997
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| | |||||||| | || ||| ||||| || |||| | |||||| | || ||
Sbjct 123996 TGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACT 123937
Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 112000
| | | || |||||||| |||| || || || | ||||| |||| || | |
Sbjct 123936 GTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAA-GTATTTGTTC 123878
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
||||| | || ||| ||||| | | | | || || || || |||||||| || | ||
Sbjct 123877 GACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCC 123818
Query 112061 ACCCGCATGAACATGTACTGTGG 112083
|| ||||||| ||||| ||||||
Sbjct 123817 ACACGCATGATCATGTGCTGTGG 123795
>seq680
Length=821847
Score = 100 bits (110), Expect = 4e-16
Identities = 290/439 (66%), Gaps = 22/439 (5%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| || || |||||||| |||||||||||||| || | || ||||| |||||
Sbjct 341147 TAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCATG 341088
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA----TGGGTGGCACCCCAACTTGTTTGAGGAG 122486
||||| || || || | ||||| | | | ||| || ||| || ||
Sbjct 341087 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGC----CAAGAGCGAGCAGCAG 341032
Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546
|| || | ||| |||||||||||| | |||| || || |||||| |||| ||
Sbjct 341031 TCGGTCAGCGACAAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGC 340972
Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG-- 122604
|| || || || || | ||| ||| |||||| |||| ||||| |||||||
Sbjct 340971 GCAAGGCAGAGCATCGGTCAAGAATTCTTGCTCAATGGCAACGGCCTC---CACGATGAT 340915
Query 122605 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGA-AGAGCTCCACG---GC 122660
|| | | | | | || || | | | || || ||| | || | ||
Sbjct 340914 GCTTTGCACGACCGACTTGGCGGGCTTGTTCTTGAGGT---GAGAGAACAGCAGGCAAGC 340858
Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720
|| || ||| | ||||| || ||||| || || || || |||||| || || |
Sbjct 340857 GAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGC 340798
Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 122779
||||||||| |||||||||||||| | || | ||| |||||| ||||||||||||||||
Sbjct 340797 CATGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAATGAGCCGGAGAAGAAGATAC 340739
Query 122780 CCTCCACACACGCAAACGC 122798
|||| ||| ||||| ||
Sbjct 340738 CCTCGACAGCAGCAAAGGC 340720
>seq638
Length=503197
Score = 86.0 bits (94), Expect = 8e-12
Identities = 199/292 (68%), Gaps = 10/292 (3%)
Strand=Plus/Minus
Query 182517 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 182576
|| |||||||||||||||||||| | ||| ||||||||| ||||| | | |||||||
Sbjct 188132 AGTCCCTTGATGTGAGAACCATCGTGATCTTGATCTGTCATGATCATTATATGACCATAT 188073
Query 182577 CGAAGTTCAGAAACATCTTG-GTAGTCTTTTCCTTGT--TGAAGACCAAGGATCTTCTTG 182633
|| | | || ||| ||| || || ||||| || ||||| | || ||||||
Sbjct 188072 CGCA-AACCGACGGTCGTTGTGTACTCCTT--CTTGTGCTGTAGACCGATGAATTTCTTG 188016
Query 182634 A-GATCATTGAA-CTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCT 182691
| | || |||| ||| ||| | || ||| | || || ||||| ||||||||
Sbjct 188015 ATGTTC--TGAATTTCCGCGTTCTTCGAAATCTGGTCAACGGAGGCGTCGCGAACATTGA 187958
Query 182692 TACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCG 182751
|||||| ||||| || || |||||| ||| || || | || |||| |||| |
Sbjct 187957 GCACTTTACCACGAAGGGGAAAAACACCGAAGTAGTCTGGATCGACCACAGCACGACCTG 187898
Query 182752 CAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTT 182803
| | ||| || || || |||||||| || | ||||||||||| ||
Sbjct 187897 CCAACGCCAGCAAGGCGGCTGAGTCACCCTCAGTCAAGATGAGAGTACATTT 187846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628016730972000
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