Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq411 208 9e-49
seq680 111 2e-19
>seq411
Length=240905
Score = 208 bits (230), Expect = 9e-49
Identities = 1124/1779 (63%), Gaps = 47/1779 (3%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
|||||||||| || | | ||| | || |||||||||||||| || ||||| || |
Sbjct 125550 TGAACTGAATCGGAGCAGACGCGGCTTGTGTACGGAGGTAGTACATGCCGGTCTTCAGGC 125491
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| |||||||| || | ||||| || | |||| | ||| || | || |
Sbjct 125490 CAAGCTTCCAGCCAGTAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCTCCTTCAAGT 125431
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| ||||| ||||| ||||||||||||||| || || ||||| ||||| | ||
Sbjct 125430 GGATGTTCAAGCTTTGAGATTGATCGATGAAGGCACCGCGGTCCGCGGCCATTTGAA--- 125374
Query 117985 CATCCTTCATCT---TGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041
|| || || |||||||||| |||||| |||| | ||| | || || || |
Sbjct 125373 CAATGTTGCGCTGACTGATTTCCCAGACAGTCTTGTACAACGCCTTGAGGTCGTCCGGAA 125314
Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101
| | | || ||| | ||| || || | || ||| | | |||||| | || |
Sbjct 125313 TGTTCGGAATGCGTTGCACGGAACCGCCGTCGGCGATGATGCGGTTCTTCATGTTCTCAG 125254
Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTC 118159
|||| | ||| | |||||||| || | ||| | |||| || || ||
Sbjct 125253 ACCACAATCCACGGTCGACGAGATCCTTCAGCAACCATGGGT--TGACGACTTGGAATTC 125196
Query 118160 ACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 118218
|| || || || | ||| ||||| ||| | ||||||||||| |||||||| |||
Sbjct 125195 TCCGGCAAGCACACGACG-AGAGTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGA 125137
Query 118219 TACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 118278
|||| ||| || | ||||||||| || ||||| ||||| | |||||| ||| ||||
Sbjct 125136 AGCCCATGATCTGCGATGTGGAGGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGCGGA 125077
Query 118279 GACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTG-----AGCTTTGT 118333
||| | | || ||||||| ||||||||||| || | || | ||
Sbjct 125076 CACCGTGCTGAGCGATCTTGGCCTTGAGCGCGTCCCAGTCCCAGAGGTCTGAAGGTGTGA 125017
Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393
| |||| |||| || |||| || || | || | || || ||||| | ||
Sbjct 125016 CGCCCC-----ACATCTCGTACTGAAGTTCGCCCTTTGAAACCGGGGAGCCCTCGTACGT 124962
Query 118394 CTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATAC 118451
||| ||||| || | | | | || | ||| | || ||| || ||||| ||
Sbjct 124961 CTCGTATGGACCA--AGCTTGCTAGCAAGGTCGCACGATGCGGTGAGCGCAGCGTGGTAG 124904
Query 118452 ATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 118510
|| || || || || | | |||| || | |||||| || ||||| | | ||
Sbjct 124903 ATGGTCTCGAAGATCTGGACGTTCAGGTGACG-GGCCTCTGGAGACTCAAAAGGCATGCG 124845
Query 118511 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570
| || |||| || ||||| ||||||||| || ||||| | || | |||
Sbjct 124844 TAGAGCCAGGAAAGCATCAGCAAGACCGCTGACACCGAGACCGATTGGTCTGTGGCGCAT 124785
Query 118571 ATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAG 118627
|| |||| || ||| ||| || || || ||||| | | | || |
Sbjct 124784 GTTGCTCTTCTTCGC---CTCAGGCACTGGGTAGTGGTTGACTTCGATGATCTTGTTCAA 124728
Query 118628 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CT 118686
|| |||||||| || | | || || ||||| || | || |||| || || ||
Sbjct 124727 GTTCTTGGTGACGACTTGCACAACCTCGTGGAGCTTCTCAAAGTCGAAAC-GCTCGTTCT 124669
Query 118687 CTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 118746
| || ||| || | || || || | || || || || ||||| | | ||| ||
Sbjct 124668 CAAGATCGACGTAGGTTGGCAGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTG 124609
Query 118747 TATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCT 118806
| |||||||| || || || ||||||||||| |||||||| || || || | |||||
Sbjct 124608 GTGCGGTGTACTCAATGATCTCAGTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCT 124549
Query 118807 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 118866
| || || ||| ||| ||||||||||| |||||| | || || ||||| |
Sbjct 124548 TCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAG 124489
Query 118867 TTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCC 118926
| |||| | | ||||| | |||||| | ||| | ||||| | | || |
Sbjct 124488 TCTGGGCTTCCAAGATAGCATACCAGACCTTTTGAGCGCGGACAGTCTCACGTCCACGAC 124429
Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986
| ||| |||||| ||||| || | || ||||| ||||| | || | ||| |
Sbjct 124428 CTTCTCTCTCGTAGCGGGTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGAC 124369
Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046
| || || || ||||| | ||| | ||||| | | || || ||||||||||
Sbjct 124368 CAGGGCACTCATTGGGGCACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGA 124309
Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106
| || ||||||||||| || || |||| ||||| || || |||| || | || |
Sbjct 124308 ACAGATCTGGGATCCAAAGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGT 124249
Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 119166
| || || | |||| ||| |||| ||| |||||||| || || ||||| | |
Sbjct 124248 GGTTCTTGCGGAGGTCCATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGG 124189
Query 119167 CGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220
||| || | | |||| ||| | |||| ||||| | |||||| ||
Sbjct 124188 CGA---ACGCGCCAGGACGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGT 124132
Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT 119280
| || || | ||| || |||| ||||| |||| ||| ||||| || ||| ||
Sbjct 124131 AGACGCGCAACATCGGGATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATC 124072
Query 119281 TATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 119340
| | || | || | |||| || || |||||||| || || ||| ||||| |
Sbjct 124071 CAGTAGCACGGATCTTGTGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGG 124012
Query 119341 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 119400
|||| | | || || ||||||| || || || |||| |||| | |||| | ||
Sbjct 124011 CGCAAGTCTTCAGTGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGA 123952
Query 119401 AGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460
|||| | || || | | || ||||||||| |||| || || || | |||||
Sbjct 123951 AGCATGAAGCCAACTGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTG 123892
Query 119461 TGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCG 119519
|||| || | | ||||| | || ||||||||| | | |||| || || || |||
Sbjct 123891 TGAA-GTATTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCG 123833
Query 119520 TGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558
|| || || | | || ||||| | ||||| || |||
Sbjct 123832 TGGATTCCAACAGCCACACGCATGATCATGTGCTGTGGT 123794
>seq680
Length=821847
Score = 111 bits (122), Expect = 2e-19
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093
|||||||||||||||||||| || || |||||| || || | ||||||||| ||||||
Sbjct 340841 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGCCATGAGACCACGCTTC 340782
Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144
||||||||||| || | |||||||| ||||||||||| ||||| |||
Sbjct 340781 TTCAACCAGAAGATGGACGCGAATGAGCCGGAGAAGAAGATACCCTCGACA 340731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618420164294200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |