Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq411 235 6e-57 seq680 113 5e-20 >seq411 Length=240905 Score = 235 bits (260), Expect = 6e-57 Identities = 1119/1750 (64%), Gaps = 55/1750 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| ||||| | || || || || || || || || | | | Sbjct 123795 CCACAGCACATGATCATGCGTGTGGCTGTTGGAATCCACGGCGACGATATCGAGGCCGCC 123854 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | ||||| | | || |||| ||||| | || || || || Sbjct 123855 ATTGAGACCTACAACTACATGTCGAACAAATAC-TTCACACACGCTTCGCCTACACTGTT 123913 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || |||||||| || | | || || | |||||| | |||| || ||||| || Sbjct 123914 CAGCGCTGGTACGCCGAATGCACAGTTGGCTTCATGCTTCTTGATCGACATGAAGGATGA 123973 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCT 104458 | || | |||||||| | || || | | | | ||||| | ||||| ||| ||| Sbjct 123974 CAGCATTGAGGGTATCTACGACACACTGAAG-ACT-TGCGCCATGATCTCGAAGAATGCT 124031 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || |||||||| || || ||| | | | || | | ||| ||| || ||| Sbjct 124032 GGTGGTATTGGCCTGAACTGCCACAAGATCCGTGCTACTGGATCATACATTGCAGGCACA 124091 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || ||| ||||| | || || ||| | ||||| | || ||| || |||||| Sbjct 124092 AACGGCACATCCAATGGTCTCATCCCGATGTTGCGCGTCTACAATAACACTGCCCGCTAT 124151 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | |||| ||| ||||| || | |||| |||| || ||||||||| Sbjct 124152 GTCGACCAAGGTGGCAACAAGCGTCCT---GGCGCGTTCGCCATCTACCTAGAGCCATGG 124208 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| ||| |||| ||| | || | || ||||| || | ||||| | ||| Sbjct 124209 CACGCAGATGTCATCTCCTTCATGGACCTCCGCAAGAACCACGGAAAGGAGGAAGTGCG- 124267 Query 104693 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| || ||||| |||| |||||| ||||| |||||||| ||||||||| | || || | Sbjct 124268 TGCACGTGATCTGTTCTTCGCTCTTTGGATCCCAGATCTGTTCATGAAGCGTGTCGAAGC 124327 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 | | | ||| | ||| | || || | || ||||||||| | |||| || Sbjct 124328 CAACGCAGAATGGACACTCATGTGCCCCAATGAGTGCCCTGGTCTCGCTGATGTGTACGG 124387 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC-TGCGACGG 104870 ||| ||||| || | || ||||| |||||| ||||||||| | ||| || ||| | Sbjct 124388 TGACGAGTTCGAGGAGCTGTACACCCGCTACGAGAGAGAAGGTCGTG-GACGTGAGACTG 124446 Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | | ||| | || ||| | ||||| | | | || || ||||||||| ||| | Sbjct 124447 TCCGCGCTCAAAAGGTCTGGTATGCTATCTTGGAAGCCCAGACTGAGACTGGTGGACCTT 124506 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || || |||| ||||| || || ||||| | || ||||| Sbjct 124507 TCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGAACGATCA 124566 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 |||||||||| | || || || ||| | || | || | ||| ||| || |||| Sbjct 124567 AGAGTTCCAACTTGTGCACTGAGATCATTGAGTACACCGCACCAGACGAGGTCGCCGTGT 124626 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110 | ||||| ||||| | ||||| || | || || |||| |||| || || || | Sbjct 124627 GCAACCTTGCATCTCTTGCTCTGCCAACCTACGTCGATCTTGAGAACGAGCGTTTCGACT 124686 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 ||| || |||||||| ||| | || |||||||| ||| | |||| | || || Sbjct 124687 TTGAGAAGCTCCACGAGGTTGTGCAAGTCGTCACCAAGAACTTGAACAAGATCATCGAAG 124746 Query 105171 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 || ||||| || |||| || || || ||| | ||| | ||||| | Sbjct 124747 TCAACCACTACCCAGTGCCTGAG---GCGAAGAAGAGCAACATGCGCCACAGACCAATCG 124803 Query 105228 GTCTCGGTGTTCAG-GGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286 ||||||||| |||| ||||| || |||| ||| | | ||| | ||||| || Sbjct 124804 GTCTCGGTG-TCAGCGGTCTTGCTGATGCTTTCCTGGCTCTACGCATGCCTTTTGAGTCT 124862 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 || || | | || | | || || |||||||| || ||||| || || Sbjct 124863 CCAGAGGCCCGTCACCTGAACGTCCAGATCTTCGAGACCATCTACCACGCTGCGCTCACC 124922 Query 105347 GC-GAGTTCAGAGTTGGCAG-AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 || || | ||| || | | | ||||||||| || || | ||||| || || | Sbjct 124923 GCATCGTGCGACCTTGCTAGCAAGCT--TGGTCCATACGAGACGTACGAGGGCTCCCCGG 124980 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-----CTA 105459 |||| | || | ||||| | || ||||||| | | | | ||||| || Sbjct 124981 TTTCAAAGGGCGAACTTCAGTACGAGATGTGGG-----GCGTCACACCTTCAGACCTCTG 125035 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 |||||||| || ||||||| ||| || | ||| | || ||| || || | Sbjct 125036 GGACTGGGACGCGCTCAAGGCCAAGATCGCTCAGCACGGTGTCCGCAACTCCCTTCTGGT 125095 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 || |||||||| || |||||||| | || ||| |||| || || ||||| || || Sbjct 125096 TGCACCAATGCCTACTGCCTCCACATCGCAGATCATGGGCTTCAACGAGTGCTTCGAGCC 125155 Query 105580 CTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||| | |||||||| ||| | | || || ||||| || | |||||| Sbjct 125156 ATACACTAGCAACATCTACTCT-CGTCGTGTGCTTGCCGGAGAATTCCAAGTCGTCAAC- 125213 Query 105639 AGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 ||| | || | || ||| || ||| | ||||| || | |||||| | | Sbjct 125214 -CCATGGTTGCTGAAGGATCTCGTCGACCGTGGATTGTGGTCTGAGAACATGAAGAACCG 125272 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 ||| | | || |||||| | ||| ||| | | ||||| | || | ||| Sbjct 125273 CATCATCGCCGACGGCGGTTCCGTGCAACGCATTCCGAACATTCCGGACGACCTCAAGGC 125332 Query 105757 GTTGTACCGCACAGTTTGGGAAATCA---AGATGAAGGATGTCATTGACATGGCCGCAGA 105813 ||||||| || || |||||||||| || || || || | |||||||| || Sbjct 125333 GTTGTACAAGACTGTCTGGGAAATCAGTCAGCGCAACATTG---TTCAAATGGCCGCGGA 125389 Query 105814 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGAT 105873 || ||| |||||| |||||| |||||| |||| || | || | || || || Sbjct 125390 CCGCGGTGCCTTCATCGATCAATCTCAAAGCTTGAACATCCACTTGAAGGAGCCCACCAT 125449 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTAC-AGTTGGAAGAAGGGTCTCAAAACGGGGATGT 105932 | |||| || | |||||| | ||| | |||||| || || || || || |||| Sbjct 125450 GGGCAAGATCACCAGCATGCAC-TTTACTGGCTGGAAGCTTGGCCTGAAGACCGGCATGT 125508 Query 105933 ATTACCTCCG 105942 | |||||||| Sbjct 125509 ACTACCTCCG 125518 >seq680 Length=821847 Score = 113 bits (124), Expect = 5e-20 Identities = 302/453 (67%), Gaps = 14/453 (3%) Strand=Plus/Plus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 || ||| |||| | |||| ||||| ||| ||||||||||||||||| || || ||| Sbjct 340702 TTCGCTATGCGATTGATCGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTC 340761 Query 94858 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 ||| | || | ||| | |||||||| ||||||||| | || ||| |||||||||||| Sbjct 340762 -GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGA 340820 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATTA 94974 ||| ||||| ||||||||||| | ||| || || || | | || || | Sbjct 340821 GCTCATCTCCCGTGACGAGGGCATGCACACTGACTTCGCTTGCCTGCTGTTCTCTCA-CC 340879 Query 94975 TTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATT 95034 | | | | || | | | | | | || || | ||| ||||||| ||| Sbjct 340880 TCAAGAACAAGCCCGCCAAGTCGGTC-GTGCAAAGCATCATCGTGGAGGCCGTTGCCATT 340938 Query 95035 GAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAA 95094 ||| ||| |||| | ||||| || || ||||| || |||| ||||| || | Sbjct 340939 GAGCAAGAATTCTTGACCGATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTC 340998 Query 95095 ATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA 95154 |||| | || ||||||| ||| |||| || || || | || | || ||| Sbjct 340999 ATGTGCCAGTACATTGAGTTTGTCGCTGACCGACTGCTG--CTCGCTCTTG--GCAACCA 341054 Query 95155 A----TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAA 95210 | | | ||| ||| || || || ||||||||||||||||| |||| ||| || Sbjct 341055 AAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAA 341114 Query 95211 GACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243 ||| ||||||||||| ||| | ||||| ||||| Sbjct 341115 GACCAACTTCTTCGAGAAGCGTGTTGGCGACTA 341147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583246619471800