Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq456 154 4e-32 seq455 100 9e-16 >seq456 Length=274388 Score = 154 bits (170), Expect = 4e-32 Identities = 478/735 (65%), Gaps = 6/735 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||||| ||||| || || || || || | | | | | |||| ||| Sbjct 84007 GCCATCGGTATCGATTTGGGTACCACGTACTCGTGCGTGGGTATCTTCAGAGATGACCGT 83948 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | ||||| || || || || || |||||| | ||||| || || | || || || || Sbjct 83947 ATCGAAATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTTGTCGCCTTCACA 83888 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || ||||| || || || || |||| || || ||| || Sbjct 83887 GACACCGAGCGTCTCATCGGTGACTCCGCGAAGAACCAAGTCGCCATGAACCCAGTCAAC 83828 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || || || |||||| | || || | ||||| | ||| | ||| | Sbjct 83827 ACAGTCTTCGACGCCAAGCGATTAATCGGACGCAAGTTCAAC-GACCCAGAGGTGCAAGC 83769 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || || || || | || | || | ||| || || | || | Sbjct 83768 CGACATGAAGCACTTCCCCTTCAAGGTCATCGACAAGGCCGGC---AAGCCTGTCATCCA 83712 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 || || | || || ||| | || ||| | || ||||| || ||||| ||||| | Sbjct 83711 AGTCGAGTTCAAGGGCGAAGAGAAGACATTCTCCCCAGAAGAGATCTCATCCATGGTCCT 83652 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||| || | || || |||| | |||| || || | | |||||| | Sbjct 83651 CACCAAGATGCGTGAGACCGCAGAGTCATACCTTGGTGGCACCGTCAACAACGCTGTTGT 83592 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 ||||| ||||| || || || || | ||| | ||||| || |||||||| ||| Sbjct 83591 CACTGTCCCAGCATACTTCAACGACTCGCAGAGACAAGCAACCAAGGATGCTGGTCTCAT 83532 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || || || || || | || || || || || ||||| || || ||||| || || Sbjct 83531 TGCTGGCTTGAACGTGCTCCGTATCATCAACGAGCCAACTGCCGCTGCCATTGCCTACGG 83472 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || || || | || || || || |||| || || || || ||||||||||| Sbjct 83471 TCTCGACAAGAAGACCGAGGGCGAGCGCAACGTTCTCATCTTCGACTTGGGTGGTGGTAC 83412 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 || ||||| || || || ||| | || ||||| || || || || || | || || || Sbjct 83411 CTTCGATGTCTCTCTTCTCACAATCGAGGAGGGTATCTTCGAGGTCAAGTCTACCGCCGG 83352 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 ||| ||||| | ||||| || || || || || ||||| ||| |||||||| || || Sbjct 83351 TGACACACACTTGGGTGGTGAGGACTTCGACAACCGTCTAGTTAACCATTTTGTCAACGA 83292 Query 349918 ATTTAAGCGTCAAGC 349932 || || || ||||| Sbjct 83291 GTTCAAACG-CAAGC 83278 >seq455 Length=1194790 Score = 100 bits (110), Expect = 9e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || ||||| || || || || ||||| Sbjct 1130985 CATACCACCACGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATC 1131044 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || ||||| || ||||| || || ||||| ||||| || || Sbjct 1131045 GGACAGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGG 1131104 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAAT 140671 |||||| || || || |||||||| || | || || || || || Sbjct 1131105 AGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGAT 1131149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515216639386835