Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq411 356 3e-93
seq680 113 5e-20
>seq411
Length=240905
Score = 356 bits (394), Expect = 3e-93
Identities = 1145/1760 (65%), Gaps = 55/1760 (3%)
Strand=Plus/Plus
Query 19097 GAGACGCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCG 19156
|||| || ||| || | ||||||| || || || || ||||| |||||||| ||
Sbjct 123789 GAGAGACCACAGCACATGATCATGCGTGTGGCTGTTGGAATCCACGGCGACGATATC--- 123845
Query 19157 CGAGTCCGC----GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCC 19212
||| |||| ||||| ||| || ||| | || | |||||| ||||| ||||
Sbjct 123846 -GAGGCCGCCATTGAGACCTACAACTACATGTCGAACAAATACTTCACACACGCTTCGCC 123904
Query 19213 GACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTAT 19272
|| || |||| ||| |||||| || | ||| || | || ||| | | | ||
Sbjct 123905 TACACTGTTCAGCGCTGGTACGCCGAATGCACAGTTGGCTTCATGCTTCTTGATCGACAT 123964
Query 19273 GAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAA 19332
||||||||||||||||||||| |||||||| || || ||| ||||| ||||| ||
Sbjct 123965 GAAGGATGACAGCATTGAGGGTATCTACGACACACTGAAGACTTGCGCCATGATCTCGAA 124024
Query 19333 GTGGTCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAA 19392
| | || ||||| || | ||||| || ||||| | | ||| || ||
Sbjct 124025 GAATGCTGGTGGTATTGGCCTGAACTGCCACAAGATCCGTGCTACTGGATCATACATTGC 124084
Query 19393 TGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGC 19452
|| || ||||| | || | ||| || |||| ||| | ||||||| ||| ||||| ||
Sbjct 124085 AGGCACAAACGGCACATCCAATGGTCTCATCCCGATGTTGCGCGTCTACAATAACACTGC 124144
Query 19453 CAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCC 19512
| | || ||| |||| || ||| ||| || ||| |||||||||||||||| |||||
Sbjct 124145 CCGCTATGTCGACCAAGGTGGCAACAAGCGTCCTGGCGCGTTCGCCATCTACCTAGAGCC 124204
Query 19513 ATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGAT 19572
||||||||| || ||||| ||| | || || ||| |||||| || | ||||| |
Sbjct 124205 ATGGCACGCAGATGTCATCTCCTTCATGGACCTCCGCAAGAACCACGGAAAGGAGGAAGT 124264
Query 19573 GCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGA 19632
||| || || || ||| || | ||||| || || || |||||| || || ||
Sbjct 124265 GCGTGCACGTGATCTGTTCTTCGCTCTTTGGATCCCAGATCTGTTCATGAAGCGTGTCGA 124324
Query 19633 GAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTA 19692
||| ||||||| || |||||||| | || |||||||| || | || || ||
Sbjct 124325 AGCCAACGCAGAATGGACACTCATGTGCCCCAATGAGTGCCCTGGTCTCGCTGATGTGTA 124384
Query 19693 CGGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGT 19752
||| || | |||| | ||| ||||| |||| || || | || || | | ||
Sbjct 124385 CGGTGACGAGTTCGAGGAGCTGTACACCCGCTACG-AG---AGAGAAGG-TCGTGGACGT 124439
Query 19753 G-----GTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGC 19807
| ||||| || | | |||||| | || | || |||| ||||| ||
Sbjct 124440 GAGACTGTCCGCGCTCAAAAGGTCTGGTATGCTATCTTGGAAGCCCAGACTGAGACTGGT 124499
Query 19808 ACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGC 19867
||| | |||| ||||||||| || || ||| |||| || ||||||||| ||||
Sbjct 124500 GGACCTTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGA 124559
Query 19868 GCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACT 19927
|||||||| |||||| |||| ||||| ||||| ||| || || ||||||
Sbjct 124560 ACGATCAAGAGTTCCAACTTGTGCACTGAGATCATTGAGTACACCGCACCAGACGAGGTC 124619
Query 19928 GCCGTGTGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTC------AAGGCCTCCTC 19980
|||||||| || || || || || ||| ||||| || | |||| || |
Sbjct 124620 GCCGTGTGCAACCTTGCATCTCT-TGCTCTGCCAACCTACGTCGATCTTGAGAACGAGCG 124678
Query 19981 CTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGT 20040
|||||||||| || | ||||||| | |||||||| || |||| |
Sbjct 124679 TTTCGACTTTGAGAAGCTCCACGAGGTTGTGCAAGTCGTCACCAAGAACTTGAACAAGAT 124738
Query 20041 CATCGATCGGAACTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCG 20097
|||||| ||| ||||| | | |||||| | ||| || ||||||||| |
Sbjct 124739 CATCGAAGTCAACCACTACCCAGTGCCTGAGGCGAAG---AAGAGCAACATGCGCCACAG 124795
Query 20098 GCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATT 20157
|| |||| |||| ||| || || || || | |||| || || || | | ||
Sbjct 124796 ACCAATCGGTCTCGGTGTCAGCGGTCTTGCTGATGCTTTCCTGGCTCTACGCATGCCTTT 124855
Query 20158 CGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGC 20217
|| ||| |||| || | || ||| ||||||||| || | |||||||| ||
Sbjct 124856 TGAGTCTCCAGAGGCCCGTCACCTGAACGTCCAGATCTTCGAGACCATCTACCACGCTGC 124915
Query 20218 CCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTC 20277
||| | ||||||||| || || | || || || |||||||||| | |||| ||
Sbjct 124916 GCTCACCGCATCGTGCGACCTTGCTAGCAAGCTTGGTCCATACGAGACGTACGAGGGCTC 124975
Query 20278 GCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCAC----TGAGA---ATG 20330
|| | || |||| || ||| || |||||||||||||| | ||| ||
Sbjct 124976 CCCGGTTTCAAAGGGCGAACTTCAGTACGAGATGTGGGGCGTCACACCTTCAGACCTCTG 125035
Query 20331 AGTTTTGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCG 20390
| | ||| ||| ||||||| ||||| ||||| | |||||||| | || |
Sbjct 125036 GGACTGGGA-CGCGCTCAAGGCCAAGATCGCTCAGCACGGTGTCCGCAACTCCCTTCTGG 125094
Query 20391 TCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGC 20450
| || || ||||| || ||||| || | ||||||||||| ||||||| |||||||
Sbjct 125095 TTGCACCAATGCCTACTGCCTCCACATCGCAGATCATGGGCTTCAACGAGTGCTTCGAGC 125154
Query 20451 CGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACA 20510
| ||||| | ||||||||||| |||||| || ||||| || ||| | || ||
Sbjct 125155 CATACACTAGCAACATCTACTCTCGTCGTGTGCTTGCCGGAGAATTCCAAGTCGTCAA-- 125212
Query 20511 AGCACCTGGTCCGCGA-----CTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA 20565
| | |||| || || | || | ||| ||||||| || || |||||
Sbjct 125213 --CCCATGGTTGCTGAAGGATCTCGTCGACCGTGGAT-TGTGGTCTGAGAACATGAAGAA 125269
Query 20566 TGAAATTGTCCGAGCCGGCGGGAGCGT-CCAGGCATT--GGATATCCCCCAGAACCTCAA 20622
|| || | |||||| ||| | | ||||| | | || || | |||||||
Sbjct 125270 CCGCATCATCGCCGACGGCGGTTCCGTGCAACGCATTCCGAACATTCCGGACGACCTCAA 125329
Query 20623 GGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGA 20682
|| | |||| ||| || ||||||||| ||| | ||| | | ||||| || ||
Sbjct 125330 GGCGTTGTACAAGACTGTCTGGGAAATCAGTCAGCGCAACATTGTTCAAATGGCCGCGGA 125389
Query 20683 TCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCT 20742
||||| |||| |||||| || || || | || || | || || | || | | |
Sbjct 125390 CCGCGGTGCCTTCATCGATCAATCTCAAAGCTTGAACATCCACTTGAAGGAGCCCACCAT 125449
Query 20743 GGCGAAGCTGAGCTCCATGCATATGTAC-GGCTGGCACAAGGGGCTCAAGACGGGCATGT 20801
|| ||| | | | |||||| | ||| |||||| | || || ||||| |||||||
Sbjct 125450 GGGCAAGATCACCAGCATGCA-CTTTACTGGCTGGAAGCTTGGCCTGAAGACCGGCATGT 125508
Query 20802 ACTATCTGCGGACCCGAGCC 20821
|||| || || || | ||||
Sbjct 125509 ACTACCTCCGTACACAAGCC 125528
Score = 316 bits (350), Expect = 2e-81
Identities = 917/1401 (65%), Gaps = 24/1401 (2%)
Strand=Plus/Minus
Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593
|||||||||| | ||||| |||||||| ||||||| ||||||||||| | || ||
Sbjct 125174 GTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGATGTGGA 125115
Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653
||| || ||||| ||||| ||||| || || || || | ||| ||| ||||| | |
Sbjct 125114 GGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGCGGACACCGTGCTGAGCGATCTTGGC 125055
Query 78654 CTTTAGGCCGTCCCAA------AATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707
||| || ||||||| | || | | || |||||||| || |||||
Sbjct 125054 CTTGAGCGCGTCCCAGTCCCAGAGGTCTGAAGGTGTGACGCCCCACATCTCGTACTGAAG 124995
Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAG 78767
|||| || |||| || |||| | |||||||||| | || || | || ||
Sbjct 124994 TTCGCCCTTTGAAACCGGGGAGCCCTCGTACGTCTCGTATGGACCAAGCTTGCTAGCAAG 124935
Query 78768 TTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTC 78827
||||| || || || || |||||||| | | ||||||||| ||| || |
Sbjct 124934 GTCGCACGATGCGGTGAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGGACGTTCAGGTG 124875
Query 78828 GCGCGCCT-TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCT 78886
|| |||| ||| | || || | | || || || ||| |||| || || ||
Sbjct 124874 ACGGGCCTCTGGAGAC-TCAAAAGGCATGCGTAGAGCCAGGAAAGCATCAGCAAGACCGC 124816
Query 78887 GGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---G 78943
||| |||| | |||| |||| |||||||||||||||||| |||||| | | |
Sbjct 124815 TGACACCGAGACCGATTGGTCTGTGGCGCATGTTGCTCTTCTT---CGCCTCAGGCACTG 124759
Query 78944 GGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGT 79003
|||| ||| ||||||| ||||| ||| |||||||| | |||||||
Sbjct 124758 GGTAGTGGTTGACTTCGATGATCTTGTTCAAGTTCTTGGTGACGACTTGCACAACCTCGT 124699
Query 79004 ACAATTTGGCGAAATCAAAATGAT--TTCCTTTGATGAAAGTCGGTAGGCACAGC----G 79057
| || | || || ||| | | ||| ||| | || ||| |||| ||| |
Sbjct 124698 GGAGCTTCTCAAAGTCGAAACGCTCGTTCTCAAGATCGACGTAGGTTGGCAGAGCAAGAG 124639
Query 79058 ATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACA 79117
|||| |||||||||||||| |||||| || | ||| ||||| || |||||||
Sbjct 124638 ATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATCTCAGTGCACA 124579
Query 79118 AATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCT 79177
| || || |||||| || |||| |||||||||||||||||| ||| || ||||
Sbjct 124578 AGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCT 124519
Query 79178 TGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAACGCCGTCCCAGATG 79236
||||| |||| | || || |||||| ||| || ||| || | |||||
Sbjct 124518 TGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCA-TACCAGACC 124460
Query 79237 TCCCGGGCCCGGACAACCTTCTTGTAC-CGACCCTGTGCGACGTACGTCCGGTACAACTC 79295
| | || |||||| || | || | ||||| | | |||| ||||| |||
Sbjct 124459 TTTTGAGCGCGGACAGTCT-CACGTCCACGACCTTCTCTCTCGTAGCGGGTGTACAGCTC 124401
Query 79296 GTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTG 79355
| ||| | || || || ||||| | || || |||||||| | |||||||| ||
Sbjct 124400 CTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGGCACATGAGTGT 124341
Query 79356 CCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAA 79415
||| || ||| || || || |||||| || || |||||||| || || |||
Sbjct 124340 CCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAAAGAGCGAAGAA 124281
Query 79416 GAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCAT 79475
|| || || ||||| ||||| | || |||||| || || || | ||| ||
Sbjct 124280 CAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCATGAAGGAGAT 124221
Query 79476 GATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCC 79535
|| || |||||||| ||||| || ||||||||||||| || |||||| ||| ||
Sbjct 124220 GACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGCTTGTTGCCACC 124161
Query 79536 CTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGC 79595
|||| ||| || ||||| ||||| ||| | || || | ||| || | || || | ||
Sbjct 124160 TTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATGAGACCATTGGA 124101
Query 79596 GACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCC 79655
|||||| || || || || || | || || || || ||||| | ||
Sbjct 124100 TGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTTGTGGCAGTTCAGGCC 124041
Query 79656 GATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTC 79715
|| || || | ||| ||||| ||||| ||| || || |||||||| |||||
Sbjct 124040 AATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCGTAGATACCCTC 123981
Query 79716 GATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACC 79775
|| ||| |||||||| ||| || |||||| | || ||||| || ||||||
Sbjct 123980 AATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCATTCGGCGTACC 123921
Query 79776 GGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGT 79835
||| |||| || || |||| ||||| |||||| | || | ||| | ||| ||
Sbjct 123920 AGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATGTAGTTGTAGGT 123861
Query 79836 CTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTA 79895
||| || || | || |||||||||||||| || || || || ||||||| | ||
Sbjct 123860 CTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCCACACGCATGATCATGTG 123801
Query 79896 CTGGGGCGTCTCGCCGACATT 79916
||| || ||||| | || ||
Sbjct 123800 CTGTGGTCTCTCGGCAACTTT 123780
>seq680
Length=821847
Score = 113 bits (124), Expect = 5e-20
Identities = 296/438 (68%), Gaps = 14/438 (3%)
Strand=Plus/Plus
Query 59988 ATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTG 60046
|| || ||||| ||| || || || ||||||||||| ||||| ||| | || |||||
Sbjct 340717 ATCGCCTTTGC-TGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCGTCCATCTTCTG 340775
Query 60047 GCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGA 60106
| | || |||||||| |||||| | ||||| | |||||||||||||| || ||||| ||
Sbjct 340776 GTTGAAGAAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGA 340835
Query 60107 CGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCC 60165
||||||| | || || || || || | ||| | || ||||| | || | |||
Sbjct 340836 CGAGGGCATGCACACTGACTTCGC-TTGCCTGCTGTTCTCTCACCTCAAG--AACAAGCC 340892
Query 60166 CTTCCAAG--GATATTCACAAGATTGTTCAGTG--GGCTTGTGAAGTGGAGAGCGAGTTC 60221
| ||||| | | | ||| | || ||| ||| || | ||| || |||
Sbjct 340893 C-GCCAAGTCGGTCGTGCAAAGCATCATC-GTGGAGGCCGTTGCCATTGAGCAAGAATTC 340950
Query 60222 ATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTAC 60281
| || || || || || ||| || | || ||| ||||| ||| ||||||
Sbjct 340951 TTGACCGATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTAC 341010
Query 60282 ATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAGAAGGACCAATT-TACGGCGT 60340
||| |||||||||| ||||| || | || | | | | || | | || ||| ||
Sbjct 341011 ATTGAGTTTGTCGCTGACCGACTGCT-GCTCGCTCTTGGCAACCAAAAGTTCTACAACGC 341069
Query 60341 GAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGA 60400
| ||||| ||||||| ||||||| |||||| | | || |||||||||||||| ||
Sbjct 341070 CACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGA 341129
Query 60401 GAAGCGGGTCGGGGATTA 60418
|||||| || || || ||
Sbjct 341130 GAAGCGTGTTGGCGACTA 341147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548511463990800
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