Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq411 206 3e-48
seq638 105 7e-18
>seq411
Length=240905
Score = 206 bits (228), Expect = 3e-48
Identities = 509/760 (67%), Gaps = 18/760 (2%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCG----TGAGACG 53248
||||||| || || | || |||||||| ||||| || || | ||| ||||||
Sbjct 123808 TCATGCGTGTGGCTGTTGGAATCCACGGCGACGA-TAT---CGAGGCCGCCATTGAGACC 123863
Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
||| ||| ||| | || ||||| || ||||| |||| || ||||||| |||||||
Sbjct 123864 TACAACTACATGTCGAACAAATACTTCACACACGCTTCGCCTACACTGTTCAGCGCTGGT 123923
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
||| | | ||| || | |||||| || | | |||||||||||| || ||
Sbjct 123924 ACGCCGAATGCACAGTTGGCTTCATGCTTCTTGATCGACATGAAGGATGACAGCATTGAG 123983
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| |||||||| || || ||| || ||| ||||| ||| | |||||||| ||
Sbjct 123984 GGTATCTACGACACACTGAAGACTTGCGCCATGATCTCGAAGAATGCTGGTGGTATTGGC 124043
Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| ||||| || ||||||| | || || || || || |||||| ||
Sbjct 124044 CTGAACTGCCACAAGATCCGTGCTACTGGATCATACATTGCAGGCACAAACGGCACATCC 124103
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
|||| || | || ||| | ||||||| ||| ||||| ||||| || ||| |||| |||
Sbjct 124104 AATGGTCTCATCCCGATGTTGCGCGTCTACAATAACACTGCCCGCTATGTCGACCAAGGT 124163
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
|| ||||| || |||||||||||||||| ||||| |||||||| || | ||
Sbjct 124164 GGCAACAAGCGTCCTGGCGCGTTCGCCATCTACCTAGAGCCATGGCACGCAGATGTCATC 124223
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667
|| | || || || ||| || || | || || |||| ||| ||||| |||||
Sbjct 124224 TCCTTCATGGACCTCCGCAAGAACCACGGAAAGGAGGAAGTGCG-TGCACGTGATCTGTT 124282
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG--GACGAGGAGTGG 53725
||||| ||||| || || || |||||| || ||| |||| ||| || |||
Sbjct 124283 CTTCGCTCTTTGGATCCCAGATCTGTTCATG--AAGCGTGTCGAAGCCAACGCAGAATGG 124340
Query 53726 TACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAAC 53785
|| |||||||| || |||||||| || ||| | ||| |||||||| ||||| |
Sbjct 124341 ACACTCATGTGCCCCAATGAGTGCCCTGGTCTCGCTGATGTGTACGGTGACGAGTTCGAG 124400
Query 53786 GAGATGTATCGGACG-TACG-CAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTG 53843
||| |||| | || |||| || ||| | || | ||| ||| || |
Sbjct 124401 GAGCTGTA-CACCCGCTACGAGAGAGAAGGTCGTGGACGTG-AGACTGTCCGCGCTCAAA 124458
Query 53844 AGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACA 53903
|||| ||| |||| ||| | | |||| ||||| || || | |||| |||||
Sbjct 124459 AGGTCTGGTATGCTATCTTGGAAGCCCAGACTGAGACTGGTGGACCTTTCATGCTCTACA 124518
Query 53904 AGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
||||| | | |||| |||||||||||||||||| ||||
Sbjct 124519 AGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGG 124558
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
||||||||||| || || || |||||||| || || || || | |||||||||||| |
Sbjct 125079 CGCAACTCCCTTCTGGTTGCACCAATGCCTACTGCCTCCACATCGCAGATCATGGGCTTC 125138
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
|||||| |||||||| ||||| | ||||||||||
Sbjct 125139 AACGAGTGCTTCGAGCCATACACTAGCAACATCTAC 125174
>seq638
Length=503197
Score = 105 bits (116), Expect = 7e-18
Identities = 295/450 (66%), Gaps = 2/450 (0%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|||||||| ||||| || |||||||| || || ||||| ||||| | || ||| ||
Sbjct 189038 CCAGTTCCAATACCATCAGCACCATTGATGAGGATCATTGGCACAATTGGGCTGTACAAT 188979
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| || || | | || || ||| | |||| | | ||| | || || ||
Sbjct 188978 TCTGGTTCGATAGTGTGGCCATCATCCTCGTTGTACCGCAAAAGCGCCTCATCCTTCTGA 188919
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
||||| | | | | |||| || | ||| |||| ||||||| ||| ||||||
Sbjct 188918 TCGAAAAGGCGGCGCGCGAAAGGTGACAGTCTCGTGTAAATATAACGAGCGCTGGCAGCA 188859
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| | ||||| ||||| | ||| || | ||||| ||||||| || |||| ||||
Sbjct 188858 TCGCTACCACCCTGGAGACGGGAACCAAAGTTACCACTTGGCTCCAGAAGATTCATGTTG 188799
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451
|||| ||||||||||| || || | |||||| || ||| || || |||||
Sbjct 188798 TTGGATCCCACAAAGTTCTGTGCAAGAGCGACAATGGTTTGTTGAAGCGAAGCATCACCG 188739
Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511
| |||||| ||| | | | || || || |||| | ||||| || || |
Sbjct 188738 TATGCATACGCAGTCAGACCAGAGACCAGACCAGCAAGCTCGACTACCTTGATATCCTTC 188679
Query 117512 GTCAGGTT-CTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570
||| ||| | || |||| || ||| || ||||| ||||||| ||||| || || ||
Sbjct 188678 TTCAAGTTGCGTCGGAAGGC-GGTATACATGACCTTTCGCTGACCAGGCTTGAGGCCGTC 188620
Query 117571 CGCCACGTGAGGGATCGAACGCTTGATGTC 117600
| ||| ||||| || ||| || ||||
Sbjct 188619 GACAACGGACGGGATGGATCGCATGTTGTC 188590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547202695811000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |