Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq530 95.1 1e-14 seq455 84.2 2e-11 >seq530 Length=291 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || |||||||| || || || || || || | ||||| || | || || Sbjct 56 CACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCTGATAGTGTGCGACCATCCTC 115 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCA 39193 | ||| |||||||| || || || |||||||||| ||||||| | || ||| ||||| Sbjct 116 CAACTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTGTCTT 174 Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| | | | || ||||||||||| || || | ||||| | | Sbjct 175 GGATCTTGGACTTGACATTGTCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCT 234 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || ||||| ||||| Sbjct 235 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 265 >seq455 Length=1194790 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| ||| || || || || ||||||| || || || |||| || || || Sbjct 1131012 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTACGGCCGTCCTCGAGTTG 1131071 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || |||||||||||||| | || | || ||| |||||| || || Sbjct 1131072 CTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 1131131 Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | |||| ||| | | | || ||||| |||||||| || | |||||| | || || | Sbjct 1131132 CGACTTGA-CGTTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTGCCGG 1131190 Query 39260 TCA 39262 ||| Sbjct 1131191 TCA 1131193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429535417755785