Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq660 107 1e-18
seq679 82.4 6e-11
>seq660
Length=72284
Score = 107 bits (118), Expect = 1e-18
Identities = 234/345 (68%), Gaps = 8/345 (2%)
Strand=Plus/Minus
Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444
|| |||||||| ||| ||||||||||||||| | ||||||||| ||| || | |
Sbjct 46084 GGATTCCAGGCAGACATGATGATGCGCCTGTCGTAAGGGTTGTTCTTGAGCTTGTGAATG 46025
Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504
| | |||||||||||| || || | ||||| |||| |||||||
Sbjct 46024 ACCTCAGCCAGCTGATCCACTCCTTGTCCAGTATAGTCGGTGTGGCAGTCCTTGTACTCG 45965
Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564
|| |||||||||||||||||||||||||| || || || ||||| || ||||| | |||
Sbjct 45964 GCACCGAAATGCCTCCATTGGAACCCGTAGACTGGCCCAAGGTCGCCTTCTTCACGGTGG 45905
Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624
| ||| |||| | | |||||||| || || | ||||| || | || |
Sbjct 45904 GAAAGGCCGACGCTGTCGAGGTATTCTCTGGATCCATTACCATCCCAAATGTGAACGTTC 45845
Query 27625 T--TCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTG--ACGAACCACAGCAGCTCCTC 27680
| || |||||| |||| | | ||| | | | ||| ||||||||||||||||| |
Sbjct 45844 TGGTCCTGGAGAG-TCTTCGCA--TTG-GTATCTGCTGCAACGAACCACAGCAGCTCTGC 45789
Query 27681 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725
|| || || |||||| | || || || ||||| || ||
Sbjct 45788 TACCACCGCGCGTAGAAAGACGCGTTTCGTGGTAAGGAGTGGCAA 45744
>seq679
Length=230803
Score = 82.4 bits (90), Expect = 6e-11
Identities = 123/170 (72%), Gaps = 6/170 (4%)
Strand=Plus/Plus
Query 48509 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTCCT 48568
|||||||||||||| ||| | | | |||| | || ||||| |||||||| |||
Sbjct 199369 TCGTCAAGGTGAGGACGAGAGTGACAAAGGTCCCACAAATCGGTGATAAGTTTGCTTCCC 199428
Query 48569 -TCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCCTTCG 48625
|||||| || ||||| ||| || | || ||| |||||||||||||| |||
Sbjct 199429 GTCACGGA-CAGAAGGGTACAATCGGTATCA--CTTACCGACAGGAGGACATGCCGTTCA 199485
Query 48626 ACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCC 48675
| |||||| | ||||||| ||||||||||||||||||| |||||
Sbjct 199486 GCGCGGACGGTCTCACGCCCGACATCATCATCAACCCCCACGCTATTCCC 199535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369498440947295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |