Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq411 168 9e-37
seq680 127 3e-24
>seq411
Length=240905
Score = 168 bits (186), Expect = 9e-37
Identities = 488/744 (66%), Gaps = 14/744 (2%)
Strand=Plus/Minus
Query 77898 TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957
||||| || || | || || ||| || || || || || | |||||| | | |||
Sbjct 124426 TCTCTCTCGTAGCGGGTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCA 124367
Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017
||||| ||||| |||||||| | || ||| || | | | | || || ||||| ||
Sbjct 124366 GGGCACTCATTGGGGCACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAAC 124307
Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTA 78077
||||| || ||||| ||||| | || ||||| || | | ||| || |||||
Sbjct 124306 AGATCTGGGATCCAAAGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGG 124247
Query 78078 TTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCC 78137
||||| || || | || || | ||| | |||||||| ||||| || || ||
Sbjct 124246 TTCTTGCGGAGGTCCATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCG 124187
Query 78138 ATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197
| | ||||| || || || || || || || | ||| | ||| |||||||| || ||
Sbjct 124186 AACGCGCCAGGACGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACG 124127
Query 78198 CTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTT 78257
| |||||| || || | ||| || ||||| || ||||| || | ||| || |||| |
Sbjct 124126 CGCAACATCGGGATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTA 124067
Query 78258 GCGCGAATATTACTAATGG-ATATC---CCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313
|| || || || ||| | || || || || || || |||| || || | ||
Sbjct 124066 GCACGGATCTTG----TGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGC 124011
Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373
|||| |||| ||| |||||||||||||| || ||||||||| |||||| | | ||
Sbjct 124010 GCAAGTCTTCAGTGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAA 123951
Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433
|| || || || || || || || | || | ||| || || || || ||
Sbjct 123950 GCATGAAGCCAACTGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGT 123891
Query 78434 AAACCATTT-TTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGAT 78492
|| |||| ||| | |||| ||||| || ||||| || | || || || |
Sbjct 123890 GAAGTATTTGTTCGACATGTAG-TTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGT 123832
Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTA 78552
| ||||| || || |||||||| | ||| ||||| ||||| || | || || |
Sbjct 123831 GGATTCCAACAGCCACACGCATGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAA 123772
Query 78553 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTC 78610
| | ||||||||| ||||| || || |||||||| || | ||| ||||| ||
Sbjct 123771 TGCGGAGCAAGTATGAGCGTTCCAGCGTCTTGAAACCAAAGTATTGGTAGTTGAAA--TC 123714
Query 78611 TCTCTCGTAAATAATAACAGAATT 78634
||| || || | ||| |||| ||
Sbjct 123713 TCTGTCATAGACAATGGCAGAGTT 123690
>seq680
Length=821847
Score = 127 bits (140), Expect = 3e-24
Identities = 338/515 (66%), Gaps = 6/515 (1%)
Strand=Plus/Minus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || ||||| || | ||| || ||||| || || | ||| || || | ||||
Sbjct 340820 TCGTTGGAGAAGGTGAGGCCAGCCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCG 340761
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || || || ||||| || || || || || ||||| ||| | | || | || ||
Sbjct 340760 AATGAGCCGGAGAAGAAGATACCCTCGACAGCAGCAAAGGCGATCAATCGCATAGCGAAA 340701
Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
| | || |||| ||||| || ||||||| |||||||| | | ||||||
Sbjct 340700 GTAGAGTCCTTGTCCGAGATCCATCGCAGTGCCCAGTCAGCCTTTCTGCGGATACAAGGG 340641
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419
|| | || || || || ||||| | || | ||| || | | ||| || ||
Sbjct 340640 ATGTTGTCGATGGCGTTGAAGAGGTATGTTCGCTGCTTGGGCTCGCTGATGTATGTGTCG 340581
Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479
|| | || || | |||||||| || || || || ||||| || ||||| ||
Sbjct 340580 ATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 340521
Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539
|||| || || | || || ||||| | | ||||| || ||| ||||| || ||
Sbjct 340520 CATCGTGCCTCCGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACA 340461
Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599
|| || || || || || ||||| | || ||| || || | |||| | |
Sbjct 340460 ATGCCGTCGGATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCA 340401
Query 48600 GTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656
| ||| || |||||||| | || ||| || || | ||| | ||||| || |||||
Sbjct 340400 TTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCTTCGGCAGTCCAG 340341
Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
||||||||||| || || || ||||| ||||||||
Sbjct 340340 AATGATGCCTCGGCCTTCTTGTACATGTTCCATAT 340306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694651910864800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |