Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq411 179 5e-40
seq680 118 2e-21
>seq411
Length=240905
Score = 179 bits (198), Expect = 5e-40
Identities = 621/957 (65%), Gaps = 14/957 (1%)
Strand=Plus/Minus
Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATC 76330
||||| | |||||| || || || ||||| ||||| | | || || | || |||
Sbjct 124648 AGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGATC 124589
Query 76331 TCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA 76390
|| ||||| | || || |||||| ||||| || || | ||||||||||| |||
Sbjct 124588 TCAGTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 124529
Query 76391 CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGAT 76450
| ||||| || || | || || ||||| ||| |||| | ||| | ||||
Sbjct 124528 GCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGCA 124469
Query 76451 TTCCAGACGACTCTAGCTTTTATTATAG-ATTTGTATCG--CTTCTCTCTTTCATATTGT 76507
| |||||| | ||| | | | | | || ||||||||| | || |
Sbjct 124468 TACCAGACCTTTTGAGCGCGGACAGTCTCACGTCCA-CGACCTTCTCTCT--CGTAGCGG 124412
Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567
|| || | | || || || || || | |||||| | | |||||| || ||||| ||
Sbjct 124411 GTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCACTCATTGGGG 124352
Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627
||||| | || ||| || | | | | || || ||||| || ||||| || |||||
Sbjct 124351 CACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAA 124292
Query 76628 AGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCT 76687
||||| | || ||||| || | | ||| || ||||| ||||| || ||
Sbjct 124291 AGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCC 124232
Query 76688 AGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGT 76747
| ||| || | ||| | |||||||| ||||| || || || | | || || ||
Sbjct 124231 ATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGC 124172
Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807
|| || || || || || | ||| | |||||||||||| || || | |||||| || ||
Sbjct 124171 TTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATG 124112
Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867
| || || ||||| || ||||| || | ||| || |||| ||||| || || |
Sbjct 124111 AGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTT-GTG 124053
Query 76868 ATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926
|| | ||||| || || || || | || ||||| | || || |||| ||||||
Sbjct 124052 GCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTC 123993
Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 76986
||||| ||||| || || |||||| |||||| | | || || || || ||
Sbjct 123992 GTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGC 123933
Query 76987 ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT-TTCAGAAA 77045
|| || || || | |||| |||||| || || || ||||| |||| ||| |
Sbjct 123932 ATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACAT 123873
Query 77046 GTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACAC 77105
|||| ||||| || ||||| | || || ||||| || ||||| ||||| ||||
Sbjct 123872 GTAG-TTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCCACAC 123814
Query 77106 GCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATT 77165
|||| | ||| ||||| |||| || || || || || | |||||||||
Sbjct 123813 GCATGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGC 123754
Query 77166 TTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAAT 77220
||||| || || |||||||| || | ||| ||||| ||||| || || | |||
Sbjct 123753 GTTCCAGCGTCTTGAAACCAAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAAT 123699
>seq680
Length=821847
Score = 118 bits (130), Expect = 2e-21
Identities = 337/515 (65%), Gaps = 6/515 (1%)
Strand=Plus/Minus
Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731
||||| || || ||||| |||| ||| || |||||||| || | ||| || || | ||||
Sbjct 340820 TCGTTGGAGAAGGTGAGGCCAGCCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCG 340761
Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791
|| || || || ||||| || || || ||||| || || |||| | || | || ||
Sbjct 340760 AATGAGCCGGAGAAGAAGATACCCTCGACAGCAGCAAAGGCGATCAATCGCATAGCGAAA 340701
Query 46792 CTGGCATCATTAT--GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848
| | || || | || ||||| | | ||||| ||||||||| | | ||||||
Sbjct 340700 GTAGAGTCCTTGTCCGAGATCCATCGCAGTGCCCAGTCAGCCTTTCTGCGGATACAAGGG 340641
Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908
|| | || || || || ||||| | || | | || | | ||||| ||
Sbjct 340640 ATGTTGTCGATGGCGTTGAAGAGGTATGTTCGCTGCTTGGGCTCGCTGATGTATGTGTCG 340581
Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968
|| | || || | || || || ||||| || || ||||| || ||||| ||
Sbjct 340580 ATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 340521
Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028
|||| ||| || | || || ||||| | | ||||| || || ||||| || ||
Sbjct 340520 CATCGTGCCTCCGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACA 340461
Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088
|| || || || || || ||||| | || ||| || || | || ||| |
Sbjct 340460 ATGCCGTCGGATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCA 340401
Query 47089 GTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145
| ||| || |||||||| | || ||| || || | ||| | ||||| || ||||||
Sbjct 340400 TTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCTTCGGCAGTCCAG 340341
Query 47146 AATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180
||||| ||||| || || || ||||| ||||||||
Sbjct 340340 AATGATGCCTCGGCCTTCTTGTACATGTTCCATAT 340306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712917066782400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |