Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq59 197 1e-45 >seq59 Length=213647 Score = 197 bits (218), Expect = 1e-45 Identities = 489/724 (68%), Gaps = 16/724 (2%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| ||| || || ||||| ||||| || ||||| | ||||| || |||||| Sbjct 93822 TGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCC 93881 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | |||| | | || || || | | Sbjct 93882 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGG--TTGCCAAGAGCGAGCAGCA 93939 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTATAAGA 16852 || || || || || || || || |||||||| | || || |||||| || | || Sbjct 93940 GTCGGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGC-GTTCATGCCGAGCAG- 93997 Query 16853 CGTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || || || | || || ||||| ||| |||||| || | || || ||| ||| || Sbjct 93998 CGCACAAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGCCTCCACAATGAT 94057 Query 16912 ACTA-GCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970 || ||| | | | | || || | | || || || |||| ||| || |||| Sbjct 94058 GCTTTGCACCACCGACTT-GGTGGGCTTGTTCTTGAGGTGAGAGAACAACAGGCAAGCGA 94116 Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 | || || | |||||||| | | ||| || ||||| || || || | || | || Sbjct 94117 AGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGCCA 94176 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 | || || ||||| ||||| || || | ||||| || || || ||||| ||||||| Sbjct 94177 TGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCGGAGAAGAAGATACCCT 94236 Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCAT 17149 |||| | ||||| || || | ||| ||| |||||| ||| |||| ||| |||||| Sbjct 94237 CGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCGAGTCCTTGTC-CGAGATCCAT 94295 Query 17150 TTCTGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 | | |||| || || ||| ||| ||||| || | || ||||| || || | Sbjct 94296 CGCAGGGCCCAGTCAGCCTTTCTGCGA-ATGCATGGGATGTTGTCGATGGCGTTGAACAG 94354 Query 17209 TTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 | | || || |||| ||| | || || || |||||||| ||| ||| | |||| Sbjct 94355 GTATGTTCGTTGCT-TAGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGG 94413 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 |||| ||||||||||| ||||| || ||||| |||||||| ||||| | |||||| | Sbjct 94414 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCGGGTATTTGCA 94473 Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387 | || || |||||| || | || || ||||| || ||||||||| |||||||| | Sbjct 94474 CCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAGA 94533 Query 17388 ACGC 17391 | || Sbjct 94534 ATGC 94537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544668417920