Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq59 320 2e-82 >seq59 Length=213647 Score = 320 bits (354), Expect = 2e-82 Identities = 565/805 (70%), Gaps = 19/805 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| ||||||||| ||||||||||| || |||||||| | ||| ||| | || ||| Sbjct 94666 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 94607 Query 116696 TCCAAGGA-CACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 || ||||| | | | ||||||| | ||| | || ||| |||||||| |||||| Sbjct 94606 TCAAAGGATCTCCA-CGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTC 94548 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || || || |||||||| ||||||||| ||||||||||| ||||||||||| Sbjct 94547 ACACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCG 94488 Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 ||| || | | ||||||| | |||| || || |||||||||||||| |||||| | Sbjct 94487 ATTCAGCGCCG-AGGTGCAAATACCCGAAGCACGATGCTTCTACGGCTTCCAGATCATGA 94429 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTC 116928 |||||||| | ||||| || | || || |||||||||||| ||| | ||| | | Sbjct 94428 TGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCTA 94369 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGC-GTCAAAGAGAAGG 116987 | ||| | | |||| ||||||||||| | || || ||| || ||| |||| Sbjct 94368 AGCAACGAACATAC--CTGTTCAACGCCATCGACAACATCCCATGCATTCGCAGA-AAGG 94312 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 | || ||||| ||||| |||||| | | || || | | |||| ||| ||| | | Sbjct 94311 CTGACTGGGCCCTGCGATGGATCTCGGACAAGGACTCGACGTTCGCTATGCGACTGATTG 94252 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 |||| || || |||||||| ||||||| || ||| ||||| |||| || ||| | | Sbjct 94251 CCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGTTGA 94192 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || ||||||||| | ||||| || ||| |||||||||||||||| | ||||||| Sbjct 94191 AGAAGCGTGGCCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGG 94132 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 | |||| ||||| || || || ||||| || | | | || | | | Sbjct 94131 GCATGCACACTGACTTCGCTTGCCTGTTGTTCTCTCACCTCAAGAACAAGCCCACCAAGT 94072 Query 117228 CGCGCGT-CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 || || || | ||| | || || |||||||| ||||| ||| | ||||| Sbjct 94071 CGGTGGTGCAAAG-CATCATTGTGGAGGCCGTCGCCATTGAGCAAGAATTCTTGACCGAT 94013 Query 117287 GCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344 || |||| ||||| ||||| || | || || || | |||| || ||||| |||| Sbjct 94012 GCCTTGCCTTGTGCG-CTGCTCGGCATGAA-CGCTAAGCTCATGTGCCAGTACATTGAGT 93955 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404 ||||||| ||| | |||||||||| || | | | ||| ||||||| | |||||| Sbjct 93954 TCGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAGTTCTACAACGCCACCAACC 93895 Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429 | | ||||| ||| | |||||| Sbjct 93894 CCTTCGACTTCATGGAGAACATCTC 93870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218272605440