Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq59 214 2e-50 >seq59 Length=213647 Score = 214 bits (236), Expect = 2e-50 Identities = 573/861 (67%), Gaps = 29/861 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || |||||||||||||| ||||| || ||||| || ||||| | |||||| | || ||| Sbjct 94666 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 94607 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | |||| || ||| | || || | Sbjct 94606 TCAAAGGATCTCCACGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTCA 94547 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||||||||| || ||||| |||||||| ||||||| || Sbjct 94546 CACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 94487 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || |||||| | | || || ||||||| ||||| || || | || Sbjct 94486 TTCAGCGCCGAGGTGCAAATACCCGAAGCACGATGCTTCTACGGCTTCCAGATCATGATG 94427 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 || ||| | || || || | || || || |||||||| || ||| | | || | | | Sbjct 94426 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCTAAG 94367 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCA 57923 | | ||| || ||||||||||| ||||| | || || || |||| | ||||| Sbjct 94366 -CAACGAACATAC-CTGTTCAACGCCATCGACAACATCCCATGCATTCGCAGA-AAGGCT 94310 Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||| | | |||||| | ||| | | || |||||||| | | || || Sbjct 94309 GACTGGGCCCTGCGATGGATCTCGGACAAG-GACTCG---ACGTTCGCTATGCGACTGAT 94254 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || || || || ||||| ||||| ||||| || ||| || || | || || ||| | Sbjct 94253 TGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGTT 94194 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| || ||||| ||| | ||||| || || ||||||| | || || |||||||| Sbjct 94193 GAAGAAGCGTGGCCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGA 94134 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 ||| | || ||||| || || ||||| ||| ||||||| | || || || || Sbjct 94133 GGGCATGCACACTGACTTCGCTTGCCTGTTGTTCTCTCACCTCAAGAACAAGCCCACCAA 94074 Query 58160 GGATCGCATCTTGGA---CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | ||| | || | ||| || ||||| ||||| || || | || || | || Sbjct 94073 G--TCG-GTGGTGCAAAGCATCATTGTGGAGGCCGTCGCCATTGAGCAAGAATTCTTGAC 94017 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| ||| | || || ||||||| |||||| | | | |||| |||||||||| Sbjct 94016 CGATGCCTTGCCTTGTGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGA 93957 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA---TTACAACACGAA 58333 ||| || || ||| |||| |||||| || |||| | | | |||||| | | Sbjct 93956 GTTCGTCGCTGACCGACTGCTGCTCG--CT-CTTGGCAACCAAAAGTTCTACAACGCCAC 93900 Query 58334 AAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaa 58393 || || || || || ||| | ||||| |||| |||||||| ||||| ||||| || Sbjct 93899 CAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAA 93840 Query 58394 aaaaGTTAGCGAATATCAAAA 58414 ||| |||| || || || Sbjct 93839 GCGTGTTGGCGACTACCAGAA 93819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765597620480