Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq59 102 2e-16 >seq59 Length=213647 Score = 102 bits (112), Expect = 2e-16 Identities = 288/439 (66%), Gaps = 9/439 (2%) Strand=Plus/Minus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 ||||||||||||| || || || |||||||| || ||||||||||||| |||||| Sbjct 94254 TTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGT 94195 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | ||||| | || | || |||| ||||||| |||||| ||| |||| || | |||| Sbjct 94194 TGAAGAAGCGTGGCCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACG 94135 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098 | || | || ||||| || ||| || |||| | | | | | |||| Sbjct 94134 AGGGCATGCACACTGACTTCGCTTGCCTGTTGTTCTCTCA-CCTCAAGAACA-AGCCCAC 94077 Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACT---GAAGCCGTCCGAATTGAACAAGAATTTC 102155 |||| | | | ||| ||| | || |||||| ||||| |||||||| Sbjct 94076 CAAG----TCGGTGGTGCAAAGCATCATTGTGGAGGCCGTCGCCATTGAGCAAGAATTCT 94021 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215 | || | | || ||||| | | | || |||||| ||| | ||| ||||||||| Sbjct 94020 TGACCGATGCCTTGCCTTGTGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACA 93961 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTA 102275 |||| || || || || ||| || | | | || ||||| ||| || | | Sbjct 93960 TTGAGTTCGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAGTTCTACAACGCCA 93901 Query 102276 CCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAA 102335 ||||||||||| |||||||| || || || |||| ||||||||||| || || | Sbjct 93900 CCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGA 93841 Query 102336 AGAGAGTCGCCGAGTATCA 102354 || | || | ||| || || Sbjct 93840 AGCGTGTTGGCGACTACCA 93822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582174217520