Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq59 104 2e-17 >seq59 Length=213647 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||||| |||||| |||| || || || || || || || | || | ||| Sbjct 94048 GAGGCCGTCGCCATTGAGCAAGAATTCTTGACCGATGCCTTGCCTTGTGCGCTGCTCGGC 93989 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| | | |||||| ||||||| ||||| || || ||| ||||| || | Sbjct 93988 ATGAACGCTAAGCTCATGTGCCAGTACATTGAGTTCGTCGCTGACCGACTGCTGCTCGCT 93929 Query 52957 CTCGGTCAGCCGAAA-TACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 || || || || ||| | ||| || || |||||||| || ||| | ||||| || Sbjct 93928 CTTGG-CAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTC 93870 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 |||| ||||| || ||||| ||||||| ||||| ||||| ||| Sbjct 93869 TCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGACTAC 93824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063107084800