Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq59 116 5e-21 >seq59 Length=213647 Score = 116 bits (128), Expect = 5e-21 Identities = 366/566 (65%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || ||||| || ||||| |||||||| | || || |||||||| Sbjct 94101 AACAACAGGCAAGCGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAG 94160 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || | ||| ||||||||||| || | ||| || ||||| || ||||| || Sbjct 94161 AAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCG 94220 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACT---GGCG 50127 || |||||||| || || || || |||||||||| |||| | | | | | | Sbjct 94221 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCGAGTCC 94280 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 |||| ||||| | ||||| || ||||| | | || || || | || Sbjct 94281 TTGTCCGAGATCCATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCG 94340 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 ||||| || || || || || || ||| || | | || || ||||| | || Sbjct 94341 ATGGCGTTGAACAGGTATGTTCGTTGCTTAGGCTCGCTGATGTATGTGTCGATGAGGAGG 94400 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 || | || || || ||||| || || ||||| || |||||||| |||| || Sbjct 94401 GAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCT 94460 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367 |||| || ||||| || | | ||||| || | | || || || || || ||||| Sbjct 94461 TCGGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCG 94520 Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT--- 50424 || || || || || | || ||| || || |||| | | ||| Sbjct 94521 GATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGC 94580 Query 50425 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 50484 || ||||| || | || ||| || || | ||| | ||||| | ||||| ||||||||| Sbjct 94581 TTGTTCCAGTCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCAGAATGATGCC 94640 Query 50485 TCTGCCTTTTTATACATATTCCAGAT 50510 || ||||| || ||||| ||||| || Sbjct 94641 TCGGCCTTCTTGTACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267507116160