Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq59 102 1e-16 >seq59 Length=213647 Score = 102 bits (112), Expect = 1e-16 Identities = 365/566 (64%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || ||||| || ||||| ||||| || | || | |||||||| Sbjct 94101 AACAACAGGCAAGCGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAG 94160 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || | ||| ||||||||||| || | ||| || || || || ||||| || Sbjct 94161 AAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCG 94220 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTC-TCTCCATAACC--GGCA 42232 || |||||||| || || || || ||||||||||| |||| | | | | | | | Sbjct 94221 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCGAGTCC 94280 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 |||| ||||| | ||||| || ||||| | | || || || | || Sbjct 94281 TTGTCCGAGATCCATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCG 94340 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352 ||||| || || || || || || ||| || | | ||||| ||||| | || Sbjct 94341 ATGGCGTTGAACAGGTATGTTCGTTGCTTAGGCTCGCTGATGTATGTGTCGATGAGGAGG 94400 Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412 || | || || || ||||| || || ||||| || |||||||| |||| || Sbjct 94401 GAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCT 94460 Query 42413 TCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472 |||| | || || || | | ||||| || | | || ||||| || || ||||| Sbjct 94461 TCGGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCG 94520 Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTG-TTAAT 42529 || || || || || | || ||| || || | ||||| | || | Sbjct 94521 GATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGC 94580 Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 || ||||| || | || ||| || || | ||| | ||||| | ||||| |||||||| Sbjct 94581 TTGTTCCAGTCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCAGAATGATGCC 94640 Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615 || ||||| || ||||| ||||| || Sbjct 94641 TCGGCCTTCTTGTACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137991949440